RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
LITAF-206ENST00000571277 RBM12Q9NTZ6 932 aaKnown RBP12.18□□□□□ -0.46
LITAF-206ENST00000571277 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
LITAF-206ENST00000571277 PCDHA7Q9UN72 937 aa12.18□□□□□ -0.46
LITAF-206ENST00000571277 OTOL1A6NHN0 477 aaPredicted RBP12.17□□□□□ -0.46
LITAF-206ENST00000571277 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 ATP2C2O75185 946 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 CSH1P0DML2 217 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 CSH2P0DML3 217 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
LITAF-206ENST00000571277 PCSK1P29120 753 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 ID4P47928 161 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 SATB1Q01826 763 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 CCINQ13939 588 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 SURF1Q15526 300 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 TAF12Q16514 161 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
LITAF-206ENST00000571277 BMT2Q1RMZ1 405 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
LITAF-206ENST00000571277 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
LITAF-206ENST00000571277 Q6ZS52 159 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 MON1AQ86VX9 555 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 KIAA2013Q8IYS2 634 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 SPEM1Q8N4L4 309 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
LITAF-206ENST00000571277 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 CRTAC1Q9NQ79 661 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 C2orf42Q9NWW7 574 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 NME7Q9Y5B8 376 aa12.17□□□□□ -0.46
LITAF-206ENST00000571277 UBE4BO95155 1302 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 CLIC2O15247 247 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 PAPSS2O95340 614 aaPredicted RBP12.16□□□□□ -0.46
LITAF-206ENST00000571277 CST3P01034 146 aaPredicted RBP12.16□□□□□ -0.46
LITAF-206ENST00000571277 TNNC2P02585 160 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.46
LITAF-206ENST00000571277 AVPR1AP37288 418 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 MAGEA11P43364 429 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 CCR3P51677 355 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 RPL10AP62906 217 aaKnown RBP12.16□□□□□ -0.46
LITAF-206ENST00000571277 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 CUL4BQ13620 913 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 PSMD6Q15008 389 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 NELFCDQ8IXH7 590 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 C12orf56Q8IXR9 622 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 RDH13Q8NBN7 331 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 RMDN1Q96DB5 314 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 SLC22A12Q96S37 553 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 SYT15Q9BQS2 421 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 TDP1Q9NUW8 608 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
LITAF-206ENST00000571277 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
LITAF-206ENST00000571277 SMG5Q9UPR3 1016 aaKnown RBP12.16□□□□□ -0.46
LITAF-206ENST00000571277 PVALEFA0A1B0GWK0 134 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 K7ESF4 209 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 KLRC4O43908 158 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 TGM1P22735 817 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 WARSP23381 471 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 HOXC13P31276 330 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 AFMP43652 599 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 CXCL12P48061 93 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 ME1P48163 572 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 CYP2J2P51589 502 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 NRLP54845 237 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 PSMC1P62191 440 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 SNRPFP62306 86 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 DNM1Q05193 864 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 CYP24A1Q07973 514 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 DMWDQ09019 674 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 LRRC32Q14392 662 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 PON2Q15165 354 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 ITPRIPL2Q3MIP1 535 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 DGKKQ5KSL6 1271 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 SPATA2LQ8IUW3 424 aaPredicted RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 HSCBQ8IWL3 235 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 GRAMD1CQ8IYS0 662 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 XXYLT1Q8NBI6 393 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 MRPS31Q92665 395 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 CYP2S1Q96SQ9 504 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 CGRRF1Q99675 332 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 XYLT2Q9H1B5 865 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 SLC39A2Q9NP94 309 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 THG1LQ9NWX6 298 aaKnown RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
LITAF-206ENST00000571277 CDH9Q9ULB4 789 aa12.15□□□□□ -0.46
LITAF-206ENST00000571277 HELZP42694 1942 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms