RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 DMC1Q14565 340 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 PSAPL1Q6NUJ1 521 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 TMEM86AQ8N2M4 240 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 PDCL2Q8N4E4 241 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 KRI1Q8N9T8 703 aaKnown RBP20.42■□□□□ 0.86
SCARF1-204ENST00000570902 LRRC15Q8TF66 581 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 HVCN1Q96D96 273 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 MYRFLQ96LU7 910 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 POLR3BQ9NW08 1133 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-204ENST00000570902 SDK1Q7Z5N4 2213 aa20.42■□□□□ 0.86
SCARF1-204ENST00000570902 OBSL1O75147 1896 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 EML5Q05BV3 1969 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 ZNF638Q14966 1978 aaKnown RBP20.41■□□□□ 0.86
SCARF1-204ENST00000570902 HUS1O60921 280 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 CKMP06732 381 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 MYL7Q01449 175 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 PSMD2Q13200 908 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 ZNF77Q15935 545 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 DAB2IPQ5VWQ8 1189 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 TCEAL6Q6IPX3 200 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 CRELD2Q6UXH1 353 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-204ENST00000570902 FSIP1Q8NA03 581 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 LARP4BQ92615 738 aaKnown RBP20.41■□□□□ 0.86
SCARF1-204ENST00000570902 TCEAL3Q969E4 200 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 TRPC7Q9HCX4 862 aa20.41■□□□□ 0.86
SCARF1-204ENST00000570902 DDX43Q9NXZ2 648 aaKnown RBP20.41■□□□□ 0.86
SCARF1-204ENST00000570902 BCLAF3A2AJT9 711 aaKnown RBP20.4■□□□□ 0.86
SCARF1-204ENST00000570902 DCLK1O15075 740 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 TADA3O75528 432 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 PROS1P07225 676 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 CYP2F1P24903 491 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 GBP1P32455 592 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 NOVA1P51513 510 aaKnown RBP20.4■□□□□ 0.86
SCARF1-204ENST00000570902 USP4Q13107 963 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 DDR2Q16832 855 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 INTS6LQ5JSJ4 861 aaKnown RBP20.4■□□□□ 0.86
SCARF1-204ENST00000570902 SDHAF4Q5VUM1 108 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 NAIF1Q69YI7 327 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-204ENST00000570902 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 STKLD1Q8NE28 680 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 TTC16Q8NEE8 873 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 SPATA18Q8TC71 538 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 CACTINQ8WUQ7 758 aaKnown RBP20.4■□□□□ 0.86
SCARF1-204ENST00000570902 EXOC7Q9UPT5 735 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 CHD6Q8TD26 2715 aa20.4■□□□□ 0.86
SCARF1-204ENST00000570902 POLR2BP30876 1174 aaKnown RBP20.39■□□□□ 0.85
SCARF1-204ENST00000570902 DDIT3P35638 169 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 DGKEP52429 567 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 TFAMQ00059 246 aaKnown RBP20.39■□□□□ 0.85
SCARF1-204ENST00000570902 EML3Q32P44 896 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 USP39Q53GS9 565 aaKnown RBP20.39■□□□□ 0.85
SCARF1-204ENST00000570902 LRRC52Q8N7C0 313 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 TSTD1Q8NFU3 115 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 FUBP3Q96I24 572 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCARF1-204ENST00000570902 L1RE1Q9UN81 338 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 AGAP1Q9UPQ3 857 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 WNT6Q9Y6F9 365 aa20.39■□□□□ 0.85
SCARF1-204ENST00000570902 C4orf47A7E2U8 309 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 ITGB3P05106 788 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 TCF3P15923 654 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 GJB2P29033 226 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 ADSSP30520 456 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 PDE6CP51160 858 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 KCNB1Q14721 858 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-204ENST00000570902 EZH1Q92800 747 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-204ENST00000570902 CYP2S1Q96SQ9 504 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 FAM213AQ9BRX8 229 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 SEL1LQ9UBV2 794 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 GTF3C4Q9UKN8 822 aa20.38■□□□□ 0.85
SCARF1-204ENST00000570902 LAMA1P25391 3075 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 LNP1A1A4G5 178 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 TULP1O00294 542 aaPredicted RBP20.37■□□□□ 0.85
SCARF1-204ENST00000570902 KHNYNO15037 678 aaKnown RBP20.37■□□□□ 0.85
SCARF1-204ENST00000570902 NFATC1O95644 943 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 LDHAP00338 332 aaKnown RBP20.37■□□□□ 0.85
SCARF1-204ENST00000570902 ACAT1P24752 427 aaKnown RBP20.37■□□□□ 0.85
SCARF1-204ENST00000570902 PCSK1P29120 753 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 LHX1P48742 406 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 PMS2CLQ68D20 193 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 SFR1Q86XK3 245 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 BRSK2Q8IWQ3 736 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 TOP6BLQ8N6T0 577 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 C1orf127Q8N9H9 656 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 SLC22A12Q96S37 553 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 PKMYT1Q99640 499 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 GCNT4Q9P109 453 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 ITGA11Q9UKX5 1188 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 ATG2BQ96BY7 2078 aa20.37■□□□□ 0.85
SCARF1-204ENST00000570902 PPP1R37O75864 691 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 CSGALNACT2Q8N6G5 542 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 ARL14EPQ8N8R7 260 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-204ENST00000570902 SH3RF2Q8TEC5 729 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 ACCSQ96QU6 501 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 IKZF4Q9H2S9 585 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 MRPL44Q9H9J2 332 aaKnown RBP20.36■□□□□ 0.85
SCARF1-204ENST00000570902 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
SCARF1-204ENST00000570902 TMEM9BQ9NQ34 198 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms