RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 USTQ9Y2C2 406 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 GABRDO14764 452 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 B3GAT3O94766 335 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 DDHD2O94830 711 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 GATMP50440 423 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 TLE2Q04725 743 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 PDE4CQ08493 712 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 TUSC3Q13454 348 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 ARHGAP17Q68EM7 881 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 ADAT2Q7Z6V5 191 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 CTU1Q7Z7A3 348 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 EMC1Q8N766 993 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 SLC2A14Q8TDB8 520 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■■□□ 19
PDXDC1-216ENST00000569715 SEZ6LQ9BYH1 1024 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 CARD9Q9H257 536 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 HIPK3Q9H422 1215 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 RNF14Q9UBS8 474 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 NR2E1Q9Y466 385 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 PGRMC1O00264 195 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 INPPL1O15357 1258 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 FGGP02679 453 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 PYGMP11217 842 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 CTNNA2P26232 953 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 RPL9P32969 192 aaKnown RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 CYP2C18P33260 490 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 RFC1P35251 1148 aaPredicted RBP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 GABRB2P47870 512 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 LLGL1Q15334 1064 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 DCUN1D2Q6PH85 259 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 DSTYKQ6XUX3 929 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 ANKRD33Q7Z3H0 272 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 UBL4BQ8N7F7 174 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 SELENOOQ9BVL4 669 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
PDXDC1-216ENST00000569715 CLDN5O00501 218 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 ITIH3Q06033 890 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 FAM183BPQ6ZVS7 135 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 PLEKHA4Q9H4M7 779 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 DDX43Q9NXZ2 648 aaKnown RBP11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 TTC3P53804 2025 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 F8VP50 259 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 ENPP3O14638 875 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 EOMESO95936 686 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 GJC1P36383 396 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 STILQ15468 1287 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 MMGT1Q8N4V1 131 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 SLC35F5Q8WV83 523 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 FTHL17Q9BXU8 183 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 HCSTQ9UBK5 93 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 LAMA2P24043 3122 aaKnown RBP11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 ZMYND10O75800 440 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 COL6A1P12109 1028 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 FUKQ8N0W3 1084 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 MCRS1Q96EZ8 462 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 TBC1D13Q9NVG8 400 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 DNAJB4Q9UDY4 337 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 MICAL3Q7RTP6 2002 aa11.54□□□□□ -0.56
PDXDC1-216ENST00000569715 CCDC66A2RUB6 948 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 KRT3P12035 628 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 LBX1P52954 281 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 GSCP56915 257 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 MDH1BQ5I0G3 518 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 NOMO2Q5JPE7 1267 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TRNP1Q6NT89 227 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 RTP3Q9BQQ7 232 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 B3GNT5Q9BYG0 378 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 KLHL11Q9NVR0 708 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SIGLEC16A6NMB1 481 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 GRAP2O75791 330 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 PTPN1P18031 435 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 CLCN6P51797 869 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 RABGGTBP53611 331 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 VSNL1P62760 191 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SLC7A5Q01650 507 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TAF5Q15542 800 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 FAM102AQ5T9C2 384 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 DEFB128Q7Z7B8 93 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 KLHL7Q8IXQ5 586 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TNIP3Q96KP6 325 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 KRT12Q99456 494 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms