RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 HOXA9P31269 272 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ATICP31939 592 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 VIPR2P41587 438 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 MXI1P50539 228 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 AP3M2P53677 418 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 LRRC63Q05C16 580 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TDGQ13569 410 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 VEPH1Q14D04 833 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TPD52L1Q16890 204 aaPredicted RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ZACNQ401N2 412 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CBWD6Q4V339 395 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CBWD3Q5JTY5 395 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 PRSS36Q5K4E3 855 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CBWD5Q5RIA9 395 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 GPR158Q5T848 1215 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TANGO2Q6ICL3 276 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 HFE2Q6ZVN8 426 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 PLPP6Q8IY26 295 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 SHKBP1Q8TBC3 707 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 SPPL2BQ8TCT7 592 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 EDAQ92838 391 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 PCED1BQ96HM7 432 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 IMPG2Q9BZV3 1241 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ZNF518BQ9C0D4 1074 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 APOBEC3GQ9HC16 384 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 TRPC7Q9HCX4 862 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM49BQ9NUQ9 324 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 ARMCX3Q9UH62 379 aaPredicted RBP9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
GTF3C1-210ENST00000569394 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC38A8A6NNN8 435 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 IKBKBO14920 756 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 MOSPD3O75425 235 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 C1RP00736 705 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 RFX1P22670 979 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ANXA13P27216 316 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ASPAP45381 313 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 NDST1P52848 882 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 NOP14P78316 857 aaKnown RBP9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 GPC5P78333 572 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 CLDN10P78369 228 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 HTR4Q13639 388 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 NFE2Q16621 373 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 NFIL3Q16649 462 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 DPCR1Q3MIW9 517 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 IER5LQ5T953 404 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 KRT39Q6A163 491 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ASTLQ6HA08 431 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 TTI2Q6NXR4 508 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ITIH5Q86UX2 942 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 TMC8Q8IU68 726 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ELOA2Q8IYF1 753 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 SLC44A3Q8N4M1 653 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 MAB21L3Q8N8X9 362 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 FLCNQ8NFG4 579 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ZSCAN18Q8TBC5 510 aaPredicted RBP9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 TWNKQ96RR1 684 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 PKMYT1Q99640 499 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 ARID3AQ99856 593 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 B3GNT5Q9BYG0 378 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 MFSD1Q9H3U5 465 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 TMEM8AQ9HCN3 771 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 RAB20Q9NX57 234 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 EPS15L1Q9UBC2 864 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 MYH10P35580 1976 aa9.62□□□□□ -0.87
GTF3C1-210ENST00000569394 F8VP50 259 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 ZNF197O14709 1029 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 MAPK13O15264 365 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 TACC1O75410 805 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 ASS1P00966 412 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 CALCAP01258 141 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 P4HA1P13674 534 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 USP46P62068 366 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 COBLL1Q53SF7 1204 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 FAM171BQ6P995 826 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 GAREM2Q75VX8 874 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 FILIP1Q7Z7B0 1213 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 SIX5Q8N196 739 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 B3GALNT2Q8NCR0 500 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 FBXL13Q8NEE6 735 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 MYCBPAPQ8TBZ2 947 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 C2orf15Q8WU43 125 aaKnown RBP9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 PSMG2Q969U7 264 aa9.61□□□□□ -0.87
GTF3C1-210ENST00000569394 GCNAQ96QF7 691 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms