RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	TNFSF13B	Q9Y275	285 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	SNCAIP	Q9Y6H5	919 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	WDR81	Q562E7	1941 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	LOC102724159	A0A0B4J2E5	919 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	INO80B-WBP1	J3KQ70	363 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	MCF2L	O15068	1137 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	HBP1	O60381	514 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	CST8	O60676	142 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	KRT19	P08727	400 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	KDELR1	P24390	212 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	RFC1	P35251	1148 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	CTCF	P49711	727 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	NCALD	P61601	193 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	OTUD4	Q01804	1114 aa	Known RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	MYO1E	Q12965	1108 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	VGLL4	Q14135	290 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	PWP2	Q15269	919 aa	Known RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	TAZ	Q16635	292 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	LY6K	Q17RY6	165 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	WDR72	Q3MJ13	1102 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	PTPN20	Q4JDL3	420 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	EFHC2	Q5JST6	749 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	TREML2	Q5T2D2	321 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	ACTL9	Q8TC94	416 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	TRPM4	Q8TD43	1214 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	LRRC8C	Q8TDW0	803 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	ALKBH8	Q96BT7	664 aa	Known RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	HAUS1	Q96CS2	278 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	KLHL29	Q96CT2	875 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	PAIP2	Q9BPZ3	127 aa	Known RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	INO80B	Q9C086	356 aa	Predicted RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	ZWILCH	Q9H900	591 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	ASNSD1	Q9NWL6	643 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	FZD1	Q9UP38	647 aa		13.31	□□□□□ -0.28
PKM-222	ENST00000568883	MYH9	P35579	1960 aa	Known RBP	13.31	□□□□□ -0.28
PKM-222	ENST00000568883	C3orf70	A6NLC5	250 aa	Predicted RBP	13.3	□□□□□ -0.28
PKM-222	ENST00000568883	TTLL13P	A6NNM8	815 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	APOC4-APOC2	K7ER74	178 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	LRCH4	O75427	683 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	USP2	O75604	605 aa	Predicted RBP	13.3	□□□□□ -0.28
PKM-222	ENST00000568883	DCTN3	O75935	186 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	APOC2	P02655	101 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	DES	P17661	470 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	MARK3	P27448	753 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	PHKA2	P46019	1235 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	POU5F1B	Q06416	359 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	SEPT7	Q16181	437 aa	Known RBP	13.3	□□□□□ -0.28
PKM-222	ENST00000568883	PDK4	Q16654	411 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	TMEM63B	Q5T3F8	832 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	WLS	Q5T9L3	541 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	HHAT	Q5VTY9	493 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	PRUNE1	Q86TP1	453 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	PNMA8A	Q86V59	439 aa	Predicted RBP	13.3	□□□□□ -0.28
PKM-222	ENST00000568883	DHX37	Q8IY37	1157 aa	Known RBP	13.3	□□□□□ -0.28
PKM-222	ENST00000568883	PDIK1L	Q8N165	341 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	LRRC71	Q8N4P6	559 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	GLIS1	Q8NBF1	620 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	KCTD6	Q8NC69	237 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	DENND1A	Q8TEH3	1009 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	RSAD1	Q9HA92	442 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	NOD2	Q9HC29	1040 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	USH1C	Q9Y6N9	552 aa		13.3	□□□□□ -0.28
PKM-222	ENST00000568883	HMGCR	P04035	888 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	MCF2	P10911	925 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ETS1	P14921	441 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	CA4	P22748	312 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	GCA	P28676	217 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	STIP1	P31948	543 aa	Known RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	PCK1	P35558	622 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	PTPN11	Q06124	597 aa	Predicted RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	TFDP2	Q14188	446 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	FAM47C	Q5HY64	1035 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	TXNRD3NB	Q6F5E7	133 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	GADL1	Q6ZQY3	521 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	CEP57	Q86XR8	500 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	XYLT1	Q86Y38	959 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	RFX6	Q8HWS3	928 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	NLRP4	Q96MN2	994 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	SPATA33	Q96N06	139 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	MAK16	Q9BXY0	300 aa	Known RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ASB7	Q9H672	318 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	VRTN	Q9H8Y1	702 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	BAIAP2L1	Q9UHR4	511 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	SPAG6	O75602	509 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	ZBTB7A	O95365	584 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	VDR	P11473	427 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	MAP2K2	P36507	400 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	GABRB2	P47870	512 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	RAD23B	P54727	409 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	WDR4	P57081	412 aa	Known RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	DYNLT1	P63172	113 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	1e-6	■■■■■ 26.9
PKM-222	ENST00000568883	KCTD2	Q14681	263 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	PKN2	Q16513	984 aa	Known RBP	13.29	□□□□□ -0.28
PKM-222	ENST00000568883	SPDYA	Q5MJ70	313 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	FYB2	Q5VWT5	728 aa		13.29	□□□□□ -0.28
PKM-222	ENST00000568883	CHADL	Q6NUI6	762 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms