RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 RUBCNQ92622 972 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 PKMYT1Q99640 499 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 SYT15Q9BQS2 421 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 FAM126AQ9BYI3 521 aaPredicted RBP16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 CDH9Q9ULB4 789 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 ANK1P16157 1881 aa16.02■□□□□ 0.16
CCNDBP1-213ENST00000568507 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.15
CCNDBP1-213ENST00000568507 HCRTO43612 131 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 EXOC3O60645 756 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 NOL4O94818 638 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 LMO2P25791 158 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 BMT2Q1RMZ1 405 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 CC2D1AQ6P1N0 951 aaPredicted RBP16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 FAM171BQ6P995 826 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 MAMSTRQ6ZN01 415 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 TMEM150AQ86TG1 271 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 MON1AQ86VX9 555 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 GRAMD1CQ8IYS0 662 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 STKLD1Q8NE28 680 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 KIF9Q9HAQ2 790 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 PRMT8Q9NR22 394 aaPredicted RBP16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 GKN1Q9NS71 199 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 TDP1Q9NUW8 608 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 CFAP54Q96N23 3096 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 TSC2P49815 1807 aa16.01■□□□□ 0.15
CCNDBP1-213ENST00000568507 PHACTR2O75167 634 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 ATP2C2O75185 946 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CLSTN1O94985 981 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CTHP32929 405 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 GNL1P36915 607 aaPredicted RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 GRIK1P39086 918 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CXCL12P48061 93 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 PSMC1P62191 440 aaKnown RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 TNNC1P63316 161 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CYP27A1Q02318 531 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 TNK2Q07912 1038 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 ITPRIPL2Q3MIP1 535 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 DGKKQ5KSL6 1271 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 LIMS2Q7Z4I7 341 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 FSIP1Q8NA03 581 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 SUMF1Q8NBK3 374 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 ZBTB44Q8NCP5 570 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 KBTBD7Q8WVZ9 684 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 USP13Q92995 863 aaPredicted RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 TRMT2BQ96GJ1 504 aaKnown RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 TRPC7Q9HCX4 862 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 EXOC1Q9NV70 894 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 MIA3Q5JRA6 1907 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 ANXA13P27216 316 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 MAGEA11P43364 429 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 PSMD2Q13200 908 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 PON2Q15165 354 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CCDC142Q17RM4 750 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 WDR72Q3MJ13 1102 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 VSTM1Q6UX27 236 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 C12orf56Q8IXR9 622 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 OR6B3Q8NGW1 331 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 NELL1Q92832 810 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 MYLPFQ96A32 169 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 PAGE5Q96GU1 130 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 SPATA32Q96LK8 384 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 MYRFLQ96LU7 910 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 RBM12Q9NTZ6 932 aaKnown RBP16■□□□□ 0.15
CCNDBP1-213ENST00000568507 NCDNQ9UBB6 729 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 USP25Q9UHP3 1055 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CCL26Q9Y258 94 aa16■□□□□ 0.15
CCNDBP1-213ENST00000568507 CACNA1IQ9P0X4 2223 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 TRAV19A0A0A6YYK7 116 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 A0A1B0GVL5 298 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 TACC1O75410 805 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 FAM163BP0C2L3 166 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 USP17L7P0C7H9 530 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 BDNFP23560 247 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 CMA1P23946 247 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 ATICP31939 592 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 ID4P47928 161 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 KRT85P78386 507 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 AMPD2Q01433 879 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 RUNX3Q13761 415 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 ZNF268Q14587 947 aaPredicted RBP15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 TXNDC11Q6PKC3 985 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 SPEM1Q8N4L4 309 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 TTC16Q8NEE8 873 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 MRPL45Q9BRJ2 306 aaKnown RBP15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 NXF1Q9UBU9 619 aaKnown RBP15.99■□□□□ 0.15
CCNDBP1-213ENST00000568507 FAM186AA6NE01 2351 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms