RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 RDH13Q8NBN7 331 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 TRMT2BQ96GJ1 504 aaKnown RBP20.27■□□□□ 0.84
SPSB3-210ENST00000568416 MYRFLQ96LU7 910 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 EPC1Q9H2F5 836 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 THG1LQ9NWX6 298 aaKnown RBP20.27■□□□□ 0.84
SPSB3-210ENST00000568416 RCOR1Q9UKL0 485 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 FANCMQ8IYD8 2048 aa20.27■□□□□ 0.84
SPSB3-210ENST00000568416 ATP2C2O75185 946 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CST3P01034 146 aaPredicted RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 LMO2P25791 158 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 AVPR1AP37288 418 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CYP24A1Q07973 514 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CUL4BQ13620 913 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 TXNDC8Q6A555 127 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 C12orf56Q8IXR9 622 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 DCLK2Q8N568 766 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 XXYLT1Q8NBI6 393 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 MRPS31Q92665 395 aaKnown RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CGRRF1Q99675 332 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 FAM83CQ9BQN1 747 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 KIF9Q9HAQ2 790 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 SLC39A2Q9NP94 309 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 GKN1Q9NS71 199 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 RBM12Q9NTZ6 932 aaKnown RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 TDP1Q9NUW8 608 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 UXTQ9UBK9 157 aaPredicted RBP20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CFAP45Q9UL16 551 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 CCL26Q9Y258 94 aa20.26■□□□□ 0.83
SPSB3-210ENST00000568416 DLATP10515 647 aaKnown RBP20.25■□□□□ 0.83
SPSB3-210ENST00000568416 WARSP23381 471 aaKnown RBP20.25■□□□□ 0.83
SPSB3-210ENST00000568416 MAGEA11P43364 429 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 AFMP43652 599 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 ID4P47928 161 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 CYP2J2P51589 502 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 PPP2R5DQ14738 602 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 DGKKQ5KSL6 1271 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 HS2ST1Q7LGA3 356 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 KIAA2013Q8IYS2 634 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 SPEM1Q8N4L4 309 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 RIN3Q8TB24 985 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 FNBP1Q96RU3 617 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 HINFPQ9BQA5 517 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 GZF1Q9H116 711 aaPredicted RBP20.25■□□□□ 0.83
SPSB3-210ENST00000568416 CRTAC1Q9NQ79 661 aa20.25■□□□□ 0.83
SPSB3-210ENST00000568416 CGNQ9P2M7 1197 aaKnown RBP20.25■□□□□ 0.83
SPSB3-210ENST00000568416 TNNI1P19237 187 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 CXCL12P48061 93 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 NRLP54845 237 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 PSMC1P62191 440 aaKnown RBP20.24■□□□□ 0.83
SPSB3-210ENST00000568416 SATB1Q01826 763 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 ZNF268Q14587 947 aaPredicted RBP20.24■□□□□ 0.83
SPSB3-210ENST00000568416 PON2Q15165 354 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 SCN4BQ8IWT1 228 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 GRAMD1CQ8IYS0 662 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 HPS4Q9NQG7 708 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 SERTAD1Q9UHV2 236 aa20.24■□□□□ 0.83
SPSB3-210ENST00000568416 CACNA1IQ9P0X4 2223 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 KLRC4O43908 158 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 PAPSS2O95340 614 aaPredicted RBP20.23■□□□□ 0.83
SPSB3-210ENST00000568416 FAM163BP0C2L3 166 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 RUNX3Q13761 415 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 CCINQ13939 588 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 MAPRE1Q15691 268 aaKnown RBP20.23■□□□□ 0.83
SPSB3-210ENST00000568416 KNOP1Q1ED39 458 aaKnown RBP20.23■□□□□ 0.83
SPSB3-210ENST00000568416 VSTM1Q6UX27 236 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 Q6ZS52 159 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 CEP57L1Q8IYX8 460 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 ZNF516Q92618 1163 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 CCDC127Q96BQ5 260 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 MMS19Q96T76 1030 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 MAGEC2Q9UBF1 373 aaPredicted RBP20.23■□□□□ 0.83
SPSB3-210ENST00000568416 SMG5Q9UPR3 1016 aaKnown RBP20.23■□□□□ 0.83
SPSB3-210ENST00000568416 NME7Q9Y5B8 376 aa20.23■□□□□ 0.83
SPSB3-210ENST00000568416 KIF26AQ9ULI4 1882 aaPredicted RBP20.22■□□□□ 0.83
SPSB3-210ENST00000568416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.22■□□□□ 0.83
SPSB3-210ENST00000568416 ACTN4O43707 911 aaKnown RBP20.22■□□□□ 0.83
SPSB3-210ENST00000568416 TACC1O75410 805 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
SPSB3-210ENST00000568416 PDGFRBP09619 1106 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 SLFN14P0C7P3 912 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 TRIM68Q6AZZ1 485 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 SYNPOQ8N3V7 929 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 SPATA17Q96L03 361 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 CEP295NLQ96MC4 621 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 MRPL45Q9BRJ2 306 aaKnown RBP20.22■□□□□ 0.83
SPSB3-210ENST00000568416 NCDNQ9UBB6 729 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 VPS13AQ96RL7 3174 aa20.22■□□□□ 0.83
SPSB3-210ENST00000568416 OTOL1A6NHN0 477 aaPredicted RBP20.21■□□□□ 0.83
SPSB3-210ENST00000568416 K7ESF4 209 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 BDNFP23560 247 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 FAM160A1Q05DH4 1040 aa20.21■□□□□ 0.83
SPSB3-210ENST00000568416 MYCBPAPQ8TBZ2 947 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms