RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZNF287Q9HBT7 754 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 A1CFQ9NQ94 594 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 FOXJ2Q9P0K8 574 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 RGS17Q9UGC6 210 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 OGDHLQ9ULD0 1010 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 MRPS17Q9Y2R5 130 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 ANO9A1A5B4 782 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 TMEM191CA6NGB0 347 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 TRIAP1O43715 76 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 GCP02774 474 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CSF1RP07333 972 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CYP2C9P11712 490 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 PHKG2P15735 406 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 KCNA3P22001 575 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CD6P30203 668 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 PLA2G5P39877 138 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 FOLR3P41439 243 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CASP5P51878 434 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 ZNF543Q08ER8 600 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 MYO1EQ12965 1108 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 MPP3Q13368 585 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 RAB32Q13637 225 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 PLA1AQ53H76 456 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 MPP5Q8N3R9 675 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 RNF152Q8N8N0 203 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 RAPGEF4Q8WZA2 1011 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 FAM136AQ96C01 138 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 AGAP2Q99490 1192 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 ACTRT3Q9BYD9 372 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CHST8Q9H2A9 424 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CXorf36Q9H7Y0 433 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 CYP4F11Q9HBI6 524 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 XPNPEP3Q9NQH7 507 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 PACSIN3Q9UKS6 424 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 NDRG4Q9ULP0 352 aaKnown RBP4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
HERPUD1-212ENST00000567944 A0A087X1B8 175 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 MBD3L4A6NDZ8 208 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 MBD3L3A6NE82 208 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 MYO1CO00159 1063 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 MGST3O14880 152 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PPM1DO15297 605 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 RPL17P18621 184 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PCSK6P29122 969 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PRIM2P49643 509 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 DGKEP52429 567 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 INHBCP55103 352 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 FSTL1Q12841 308 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PTPRRQ15256 657 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 NPY5RQ15761 445 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 TXNRD1Q16881 649 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 ARHGAP40Q5TG30 622 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 IL31Q6EBC2 164 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PPP4R4Q6NUP7 873 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 TOR1AIP2Q8NFQ8 470 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 RFKQ969G6 155 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 CHFRQ96EP1 664 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 PDLIM2Q96JY6 352 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 MOGAT1Q96PD6 335 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 TBCBQ99426 244 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 TPSD1Q9BZJ3 242 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 SYNPO2LQ9H987 977 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 AS3MTQ9HBK9 375 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 DKK3Q9UBP4 350 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 SERTAD3Q9UJW9 196 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 CORO2BQ9UQ03 480 aa4.78□□□□□ -1.64
HERPUD1-212ENST00000567944 KPNA5O15131 536 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 MPPED1O15442 326 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 PEX1O43933 1283 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 KRT18P05783 430 aaKnown RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 XRCC6P12956 609 aaKnown RBP eCLIP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 TSHRP16473 764 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 KLRC1P26715 233 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 AVPR1BP47901 424 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 TM4SF4P48230 202 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 ALDH5A1P51649 535 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 NXPH1P58417 271 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 ITIH3Q06033 890 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 PTCHD3Q3KNS1 767 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 ICE2Q659A1 982 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 FCRL6Q6DN72 434 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 CCSAPQ6IQ19 270 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 RGS7BPQ6MZT1 257 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 UNC13DQ70J99 1090 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 KCTD20Q7Z5Y7 419 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 DTX2Q86UW9 622 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 SUPT20HQ8NEM7 779 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 ATG4AQ8WYN0 398 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 TFAP2BQ92481 460 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 CAVIN3Q969G5 261 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 SLC39A13Q96H72 371 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 PGBD1Q96JS3 809 aa4.77□□□□□ -1.65
HERPUD1-212ENST00000567944 STRBPQ96SI9 672 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms