RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 GAS6Q14393 721 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PSMD6Q15008 389 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PON2Q15165 354 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 KNOP1Q1ED39 458 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 WDR44Q5JSH3 913 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 TRIM68Q6AZZ1 485 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 USP13Q92995 863 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 SPATA32Q96LK8 384 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 CYP2S1Q96SQ9 504 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 CRTAC1Q9NQ79 661 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 GKN1Q9NS71 199 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
GTF3C1-208ENST00000567843 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 TADA3O75528 432 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CSH1P0DML2 217 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CSH2P0DML3 217 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CHRNB1P11230 501 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 BDNFP23560 247 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 MAGEA9P43362 315 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 MYL6P60660 151 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 SATB1Q01826 763 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 TRPC3Q13507 836 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 Q6ZS52 159 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 OR6B3Q8NGW1 331 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 RIN3Q8TB24 985 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 SLC22A12Q96S37 553 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CHRDQ9H2X0 955 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 SNX25Q9H3E2 840 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 EBF3Q9H4W6 596 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 ZNF292O60281 2723 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 UBE4BO95155 1302 aa13.08□□□□□ -0.32
GTF3C1-208ENST00000567843 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 PHACTR2O75167 634 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 NOL4O94818 638 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 ARSAP15289 507 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 CTHP32929 405 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 GNL1P36915 607 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 GRIK1P39086 918 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 USP46P62068 366 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 TNNC1P63316 161 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 BIRC3Q13489 604 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 LPAL2Q16609 132 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 FAM171BQ6P995 826 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 DPH6Q7L8W6 267 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 LIMS2Q7Z4I7 341 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 DPEP3Q9H4B8 488 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 GDPD2Q9HCC8 539 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 ABCB6Q9NP58 842 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 C2orf42Q9NWW7 574 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 THG1LQ9NWX6 298 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
GTF3C1-208ENST00000567843 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 OTOL1A6NHN0 477 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 CMA1P23946 247 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 NDUFA8P51970 172 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 CDH8P55286 799 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 DLG4P78352 724 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 KRT85P78386 507 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 DMWDQ09019 674 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 IFRD2Q12894 506 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 ITPRIPL2Q3MIP1 535 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 ZNF528Q3MIS6 628 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 CFAP221Q4G0U5 840 aa13.06□□□□□ -0.32
GTF3C1-208ENST00000567843 NAIF1Q69YI7 327 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms