RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SLC26A11Q86WA9 606 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 HEATR4Q86WZ0 1026 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 VPS50Q96JG6 964 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 TDRD3Q9H7E2 651 aaKnown RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 CYLDQ9NQC7 956 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 SLC39A10Q9ULF5 831 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 TNS3Q68CZ2 1445 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ATXN2Q99700 1313 aaKnown RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 SLC26A4O43511 780 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 TNFAIP8O95379 198 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ADORA2BP29275 332 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 RGS2P41220 211 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 DEFA1P59665 94 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 DEFA3P59666 94 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 STX5Q13190 355 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 TRAF7Q6Q0C0 670 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 CCDC81Q6ZN84 652 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 CLVS1Q8IUQ0 354 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 WNK4Q96J92 1243 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 FAM210AQ96ND0 272 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 WDR47O94967 919 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 POLBP06746 335 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 UBE3AQ05086 875 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF677Q86XU0 584 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 RNF148Q8N7C7 305 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 KRT35Q92764 455 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ZNF669Q96BR6 464 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 KCND2Q9NZV8 630 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 ADGRA3Q8IWK6 1321 aa12.9□□□□□ -0.34
CSPG4P13-202ENST00000567704 GLRA3O75311 464 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 STIP1P31948 543 aaKnown RBP12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 PBX1P40424 430 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 CDK16Q00536 496 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 EXOC3L1Q86VI1 746 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 RNF139Q8WU17 664 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 PSPC1Q8WXF1 523 aaKnown RBP12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 ULK4Q96C45 1275 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 DCLK3Q9C098 648 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 VPS33BQ9H267 617 aa12.9□□□□□ -0.35
CSPG4P13-202ENST00000567704 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 C1orf232A0A0U1RR37 186 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 KIAA0391O15091 583 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 PATL1Q86TB9 770 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 FLT3P36888 993 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 DMC1Q14565 340 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 KCTD2Q14681 263 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 PLA2G4FQ68DD2 849 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 B3GNT6Q6ZMB0 384 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 DMAP1Q9NPF5 467 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 HACD3Q9P035 362 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 SLC12A6Q9UHW9 1150 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 STARD13Q9Y3M8 1113 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 HLA-DPA1P20036 260 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 DMPKQ09013 629 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 Q4G0T1 1027 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZFRQ96KR1 1074 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 POP1Q99575 1024 aaKnown RBP12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 COG4Q9H9E3 785 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 SLCO1B3Q9NPD5 702 aa12.89□□□□□ -0.35
CSPG4P13-202ENST00000567704 USP1O94782 785 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 UPP2O95045 317 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 HMOX2P30519 316 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 MIIPQ5JXC2 388 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 RNF220Q5VTB9 566 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 PTPRN2Q92932 1015 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 NDNQ99608 321 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 MAGEB5Q9BZ81 275 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 SIK2Q9H0K1 926 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 PROSCO94903 275 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 OCM2P0CE71 109 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 OCMP0CE72 109 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 RALBP11234 206 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 LCP1P13796 627 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 AP3M2P53677 418 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms