RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 KBTBD13C9JR72 458 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 B4GALT3O60512 393 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 HUS1O60921 280 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 GRAP2O75791 330 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 KRT3P12035 628 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 ADORA2BP29275 332 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PNPLA4P41247 253 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 SSR1P43307 286 aaKnown RBP11.99□□□□□ -0.49
LINC00562-201ENST00000566385 CDK7P50613 346 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PRMT2P55345 433 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 RWDD2BP57060 319 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PDE4CQ08493 712 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 RAB6CQ53S08 254 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 ARFGAP1Q8N6T3 406 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 ACSF2Q96CM8 615 aaPredicted RBP11.99□□□□□ -0.49
LINC00562-201ENST00000566385 RAB6CQ9H0N0 254 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 ARFGAP3Q9NP61 516 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
LINC00562-201ENST00000566385 STIM2Q9P246 746 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
LINC00562-201ENST00000566385 PODXLO00592 558 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 HEXIM1O94992 359 aaKnown RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 ITGB1P05556 798 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 TKTP29401 623 aaKnown RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 GABRB2P47870 512 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 BRD3Q15059 726 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 UPP1Q16831 310 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SH3PXD2AQ5TCZ1 1133 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 TRNP1Q6NT89 227 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 ZNF598Q86UK7 904 aaKnown RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 UNC93AQ86WB7 457 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 ECHDC2Q86YB7 292 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 FAM126BQ8IXS8 530 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 CRYBG2Q8N1P7 616 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SENP8Q96LD8 212 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 TSPAN18Q96SJ8 248 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 KIAA1257Q9ULG3 409 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SIGLEC16A6NMB1 481 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 CLDN5O00501 218 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 NBNO60934 754 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SLC1A1P43005 524 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 GUCY2DQ02846 1103 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 CCNI2Q6ZMN8 369 aaPredicted RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 HACE1Q8IYU2 909 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 TTC39CQ8N584 583 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 PRELID2Q8N945 189 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 FUT8Q9BYC5 575 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 FAM124BQ9H5Z6 455 aaPredicted RBP11.98□□□□□ -0.49
LINC00562-201ENST00000566385 EPB41L5Q9HCM4 733 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 SLC38A7Q9NVC3 462 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 IP6K2Q9UHH9 426 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 STRIP2Q9ULQ0 834 aa11.98□□□□□ -0.49
LINC00562-201ENST00000566385 C9IYK1 514 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 PI4K2BG5E9Z4 385 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 DNM1LO00429 736 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 TTI1O43156 1089 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 BRCC3P46736 316 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 CARSP49589 748 aaKnown RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 RABGGTBP53611 331 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 SIX1Q15475 284 aaPredicted RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 TIGD5Q53EQ6 642 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 CD300LGQ6UXG3 332 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 CLEC4CQ8WTT0 213 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 MCRS1Q96EZ8 462 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 HEMGNQ9BXL5 484 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 SCN5AQ14524 2016 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 GABRDO14764 452 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 BEST1O76090 585 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 B3GAT3O94766 335 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 RARAP10276 462 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 CCL5P13501 91 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 RAB27AP51159 221 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 ADCY2Q08462 1091 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 ZNF268Q14587 947 aaPredicted RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 TCTN1Q2MV58 587 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 SEL1L2Q5TEA6 688 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 PAQR9Q6ZVX9 377 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 LRRC8DQ7L1W4 858 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 DDX42Q86XP3 938 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 SLC13A5Q86YT5 568 aaPredicted RBP11.97□□□□□ -0.49
LINC00562-201ENST00000566385 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 RGS18Q9NS28 235 aa11.97□□□□□ -0.49
LINC00562-201ENST00000566385 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
LINC00562-201ENST00000566385 IL1R2P27930 398 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 FLT3P36888 993 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 SMTNL2Q2TAL5 461 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms