RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TRAIPQ9BWF2 469 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.79■□□□□ 0.445e-7■■■■■ 252.6
RAB40C-210ENST00000566290 PARVAQ9NVD7 372 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 ADAM22Q9P0K1 906 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 WDR35Q9P2L0 1181 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 BARX2Q9UMQ3 279 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-210ENST00000566290 TRPV2Q9Y5S1 764 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 CDY2AQ9Y6F7 541 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
RAB40C-210ENST00000566290 M0QZ92 97 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 CEP104O60308 925 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 CSDE1O75534 798 aaKnown RBP17.78■□□□□ 0.44
RAB40C-210ENST00000566290 BAIAP3O94812 1187 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 PROSCO94903 275 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 GHRP10912 638 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-210ENST00000566290 COMTP21964 271 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 RRM1P23921 792 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 POLR2BP30876 1174 aaKnown RBP17.78■□□□□ 0.44
RAB40C-210ENST00000566290 RAD23BP54727 409 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 NNTQ13423 1086 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 LPIN1Q14693 890 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 UBXN11Q5T124 520 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 DCAF12L1Q5VU92 463 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 LIMS2Q7Z4I7 341 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 PSMB7Q99436 277 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 PHOX2BQ99453 314 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 FUT8Q9BYC5 575 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 GDF3Q9NR23 364 aa17.78■□□□□ 0.44
RAB40C-210ENST00000566290 GOLGA6L10A0A0M3HER8 536 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 PSTPIP1O43586 416 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 VDRP11473 427 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 LRRC38Q5VT99 294 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 EMBQ6PCB8 327 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 CCNI2Q6ZMN8 369 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-210ENST00000566290 UNC93AQ86WB7 457 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 HERC6Q8IVU3 1022 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 C3orf20Q8ND61 904 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.77■□□□□ 0.44
RAB40C-210ENST00000566290 WHAMMQ8TF30 809 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 FNIP1Q8TF40 1166 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 TMEM40Q8WWA1 233 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 SEC14L1Q92503 715 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 ALG3Q92685 438 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 KIF12Q96FN5 646 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 MS4A14Q96JA4 679 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 SLC9A7Q96T83 725 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 MIS12Q9H081 205 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 EPC1Q9H2F5 836 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 AGO3Q9H9G7 860 aaKnown RBP17.77■□□□□ 0.44
RAB40C-210ENST00000566290 CDHR5Q9HBB8 845 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 ANAPC7Q9UJX3 599 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 AGAP1Q9UPQ3 857 aa17.77■□□□□ 0.44
RAB40C-210ENST00000566290 ZNF318Q5VUA4 2279 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 ABHD14A-ACY1A0A1B0GW23 586 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 MYO1FO00160 1098 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 RECQL4O94761 1208 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 KRT19P08727 400 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 SETSIPP0DME0 302 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 ALADP13716 330 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 SSTR3P32745 418 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 RWDD2BP57060 319 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 MAMLD1Q13495 774 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 IKBKEQ14164 716 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 MESDQ14696 234 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 CNGA2Q16280 664 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 CYP1B1Q16678 543 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 FBXO47Q5MNV8 452 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 HDXQ7Z353 690 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 AENQ8WTP8 325 aaKnown RBP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 MAIP1Q8WWC4 291 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 CPA5Q8WXQ8 436 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 PKNOX2Q96KN3 472 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 PPP1R16BQ96T49 567 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 LRRC1Q9BTT6 524 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 DNAI2Q9GZS0 605 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 SDCBP2Q9H190 292 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 GDAP2Q9NXN4 497 aa17.76■□□□□ 0.43
RAB40C-210ENST00000566290 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 PIN4Q9Y237 131 aaKnown RBP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.76■□□□□ 0.43
RAB40C-210ENST00000566290 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-210ENST00000566290 LCHNA4D1U4 455 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 SPOPO43791 374 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 WEE2P0C1S8 567 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 IL9P15248 144 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 CD58P19256 250 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 PAX3P23760 479 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 LRPAP1P30533 357 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 GABRB2P47870 512 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms