RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CKMP06732 381 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 AGXTP21549 392 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 SYKP43405 635 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 TRPC3Q13507 836 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 SARM1Q6SZW1 724 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 R3HCC1LQ7Z5L2 792 aaKnown RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 BVESQ8NE79 360 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 RAB24Q969Q5 203 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF395Q9H8N7 513 aaPredicted RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 SLC39A10Q9ULF5 831 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 K7EPI3 171 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 PROM1O43490 865 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 KERAO60938 352 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 MMP1P03956 469 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 EDNRBP24530 442 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 GFRA1P56159 465 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 NR5A1Q13285 461 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 MEX3BQ6ZN04 569 aaKnown RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 HERC6Q8IVU3 1022 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 FANCBQ8NB91 859 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 VPS33AQ96AX1 596 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 CABS1Q96KC9 395 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 HEPHQ9BQS7 1158 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 HPS4Q9NQG7 708 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
UBFD1-205ENST00000566136 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
UBFD1-205ENST00000566136 MMEP08473 750 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 EPHX2P34913 555 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 SLC14A1Q13336 389 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 SEC23AQ15436 765 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 OASLQ15646 514 aaKnown RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 AOC3Q16853 763 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 LRFN4Q6PJG9 635 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ABRAXAS1Q6UWZ7 409 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 LDHDQ86WU2 507 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 GPC2Q8N158 579 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 CRACR2BQ8N4Y2 399 aaPredicted RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ESR2Q92731 530 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 CLMNQ96JQ2 1002 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ITPAQ9BY32 194 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 SEMA4AQ9H3S1 761 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 EXOC7Q9UPT5 735 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ZNF451Q9Y4E5 1061 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 SCN4AP35499 1836 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 RGSL1A5PLK6 1076 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TTLL8A6PVC2 850 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 PPP6R2O75170 966 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 KIAA0754O94854 1291 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TMEM253P0C7T8 217 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TFEBP19484 476 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 PRDX5P30044 214 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 CDC25BP30305 580 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TOB1P50616 345 aaPredicted RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 RAB1AP62820 205 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 GRIN1Q05586 938 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 PNOCQ13519 176 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TBCEQ15813 527 aaPredicted RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 STXBP5Q5T5C0 1151 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 RRAGBQ5VZM2 374 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TMEM214Q6NUQ4 689 aaKnown RBP11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TXLNBQ8N3L3 684 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 AFG1LQ8WV93 481 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 WASF1Q92558 559 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 ORAI3Q9BRQ5 295 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 THAP9Q9H5L6 903 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 TMEM160Q9NX00 188 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 SLC13A4Q9UKG4 626 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 CSADQ9Y600 493 aa11.36□□□□□ -0.59
UBFD1-205ENST00000566136 NID2Q14112 1375 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 POTEMA6NI47 508 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SLU7O95391 586 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 GLI1P08151 1106 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 TMEM11P17152 192 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 EEF1GP26641 437 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 AOAHP28039 575 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 CLN3Q13286 438 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 CTR9Q6PD62 1173 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 ZCCHC12Q6PEW1 402 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 ELMSAN1Q6PJG2 1045 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SLC2A7Q6PXP3 512 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 ARHGEF18Q6ZSZ5 1173 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 TRIM59Q8IWR1 403 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 CHST14Q8NCH0 376 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 NSUN4Q96CB9 384 aaKnown RBP11.35□□□□□ -0.59
UBFD1-205ENST00000566136 SHISA4Q96DD7 197 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 MRGPRX3Q96LB0 322 aa11.35□□□□□ -0.59
UBFD1-205ENST00000566136 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms