RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ELMSAN1Q6PJG2 1045 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 C16orf59Q7L2K0 433 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 ZNF572Q7Z3I7 529 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 DDX53Q86TM3 631 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 ACOT1Q86TX2 421 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 CEP57Q86XR8 500 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 ZDHHC17Q8IUH5 632 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SPATA2LQ8IUW3 424 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SLC39A11Q8N1S5 342 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 C3orf58Q8NDZ4 430 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 OLIG1Q8TAK6 271 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 STK32AQ8WU08 396 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 DDX1Q92499 740 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 RUBCNQ92622 972 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SMARCD1Q96GM5 515 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FUBP3Q96I24 572 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 HNRNPABQ99729 332 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 C11orf84Q9BUA3 381 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 TRIM62Q9BVG3 475 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 TMEM51Q9NW97 253 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 EHD2Q9NZN4 543 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 GTF3C4Q9UKN8 822 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 GUCA1BQ9UMX6 200 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 LZTS1Q9Y250 596 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 MRFAP1Q9Y605 127 aa10.4□□□□□ -0.74
SF3B3-207ENST00000566095 MRPL42Q9Y6G3 142 aaKnown RBP10.4□□□□□ -0.74
SF3B3-207ENST00000566095 FNDC1Q4ZHG4 1894 aaPredicted RBP10.4□□□□□ -0.75
SF3B3-207ENST00000566095 BRCA2P51587 3418 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 O00370 1275 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 FTLP02792 175 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 CYP1A1P04798 512 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 MAGEA10P43363 369 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 GLUD2P49448 558 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 GATMP50440 423 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 GSCP56915 257 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 NOMO3P69849 1222 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 GPC5P78333 572 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 CKAP4Q07065 602 aaKnown RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 GOLGA7BQ2TAP0 167 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 PHF13Q86YI8 300 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 ANKRD52Q8NB46 1076 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 WHAMMQ8TF30 809 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 CLP1Q92989 425 aaKnown RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 VWCEQ96DN2 955 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 HSFY1Q96LI6 401 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 WDR24Q96S15 920 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 UBXN6Q9BZV1 441 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 PNPLA8Q9NP80 782 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
SF3B3-207ENST00000566095 MARCH5Q9NX47 278 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 ADAM22Q9P0K1 906 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 MSRAQ9UJ68 235 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 PCDHA11Q9Y5I1 949 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 BACE2Q9Y5Z0 518 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 SAR1BQ9Y6B6 198 aa10.39□□□□□ -0.75
SF3B3-207ENST00000566095 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 MIF4GDA9UHW6 222 aaKnown RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 TRIM66O15016 1216 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 MICAL2O94851 1124 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 FBXO21O94952 628 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 UNGP13051 313 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 CPB1P15086 417 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 NPR3P17342 541 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 TKTP29401 623 aaKnown RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 CTNNB1P35222 781 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 GALCP54803 685 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 PSMD5Q16401 504 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 PPP2R5EQ16537 467 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 MDH1BQ5I0G3 518 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 RASIP1Q5U651 963 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 NAA35Q5VZE5 725 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 TPGS2Q68CL5 300 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 C11orf63Q6NUN7 778 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 VSTM1Q6UX27 236 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 SLC35F6Q8N357 371 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 C1orf131Q8NDD1 294 aaKnown RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 LNX1Q8TBB1 728 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-207ENST00000566095 SPPL2BQ8TCT7 592 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 GOLGA1Q92805 767 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 ELMO3Q96BJ8 720 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 NCAPGQ9BPX3 1015 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 EMILIN2Q9BXX0 1053 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 ZCWPW1Q9H0M4 648 aa10.38□□□□□ -0.75
SF3B3-207ENST00000566095 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms