RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 VEPH1Q14D04 833 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 MIIPQ5JXC2 388 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 OTOP3Q7RTS5 596 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 ITIH5Q86UX2 942 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 EHBP1Q8NDI1 1231 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 ARID3AQ99856 593 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 ELOVL4Q9GZR5 314 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 NDST4Q9H3R1 872 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 CISHQ9NSE2 258 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 HCFC1R1Q9NWW0 138 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 PATJQ8NI35 1801 aa22.43■■□□□ 1.18
SHCBP1-205ENST00000566016 MYO10Q9HD67 2058 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 OBSL1O75147 1896 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 RHOP08100 348 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 CYP2F1P24903 491 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 NCAPHQ15003 741 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 TDRD5Q8NAT2 981 aaKnown RBP22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 WHAMMQ8TF30 809 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 INTS2Q9H0H0 1204 aaKnown RBP22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 ASAH2Q9NR71 780 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 FANCLQ9NW38 375 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 ATP8B3O60423 1300 aa22.42■■□□□ 1.18
SHCBP1-205ENST00000566016 SOAT2O75908 522 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 MICAL2O94851 1124 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 CD58P19256 250 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 FSHRP23945 695 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 CYP27A1Q02318 531 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 NFKBIBQ15653 356 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 VWA3BQ502W6 1294 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 HSP90AA4PQ58FG1 418 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 GBP6Q6ZN66 633 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ACOT1Q86TX2 421 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 GJD3Q8N144 294 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ACSF2Q96CM8 615 aaPredicted RBP22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 RPGRIP1Q96KN7 1286 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 CORO1BQ9BR76 489 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ZFP37Q9Y6Q3 630 aaPredicted RBP22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ZNF197O14709 1029 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 CAVIN2O95810 425 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ZNF18P17022 549 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ZSCAN23Q3MJ62 389 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 SMYD5Q6GMV2 418 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 TRIM65Q6PJ69 517 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 ZDHHC14Q8IZN3 488 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 PLCD3Q8N3E9 789 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 UBR7Q8N806 425 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 JAKMIP2Q96AA8 810 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 FAM81BQ96LP2 452 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 NECAB3Q96P71 396 aaPredicted RBP22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 TWNKQ96RR1 684 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 LRRC3Q9BY71 257 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 B3GNT5Q9BYG0 378 aa22.41■■□□□ 1.18
SHCBP1-205ENST00000566016 TRIOO75962 3097 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 TRIM66O15016 1216 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 FGF19O95750 216 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 BDNFP23560 247 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 ZNF165P49910 485 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 NTHL1P78549 312 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 LRMPQ12912 555 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 EXOC3L4Q17RC7 722 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 PRSS36Q5K4E3 855 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 CYP4A22Q5TCH4 519 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 PDZD4Q76G19 769 aaPredicted RBP22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 DNAJB7Q7Z6W7 309 aaPredicted RBP22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 TMC8Q8IU68 726 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 PPM1KQ8N3J5 372 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 AOPEPQ8N6M6 819 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 SPATA17Q96L03 361 aa22.4■■□□□ 1.18
SHCBP1-205ENST00000566016 C2CD4DB7Z1M9 353 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 CSH1P0DML2 217 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 CSH2P0DML3 217 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 CDR1P51861 262 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 SLC5A9Q2M3M2 681 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 GET4Q7L5D6 327 aaPredicted RBP22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 ENOSF1Q7L5Y1 443 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 FAM35AQ86V20 835 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 FUKQ8N0W3 1084 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 ANKRD20A12PQ8NF67 263 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 SMARCD1Q96GM5 515 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 C8orf48Q96LL4 319 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 LPIN3Q9BQK8 851 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 COL25A1Q9BXS0 654 aaPredicted RBP22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 ZNF518BQ9C0D4 1074 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 HSD3B7Q9H2F3 369 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 EPS15L1Q9UBC2 864 aa22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 MRPS23Q9Y3D9 190 aaKnown RBP22.39■■□□□ 1.17
SHCBP1-205ENST00000566016 SMTNL1A8MU46 457 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 RAD23BP54727 409 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 KRT31Q15323 416 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 PHLDB3Q6NSJ2 640 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 PAQR9Q6ZVX9 377 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 FAM200AQ8TCP9 573 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 TRMT2BQ96GJ1 504 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 TMEM176AQ96HP8 235 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 MYRFLQ96LU7 910 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 HNRNPABQ99729 332 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 CRACR2AQ9BSW2 395 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 CD320Q9NPF0 282 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 APEX2Q9UBZ4 518 aa22.38■■□□□ 1.17
SHCBP1-205ENST00000566016 CDH7Q9ULB5 785 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms