RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MSTO1Q9BUK6 570 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 PLXNB3Q9ULL4 1909 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.21
RNF40-208ENST00000565995 FREM2Q5SZK8 3169 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 DCLK1O15075 740 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 NOL4O94818 638 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 NMT1P30419 496 aaKnown RBP13.76□□□□□ -0.21
RNF40-208ENST00000565995 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 ZNF77Q15935 545 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 NFE2Q16621 373 aaPredicted RBP13.76□□□□□ -0.21
RNF40-208ENST00000565995 EML3Q32P44 896 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 MRPS31Q92665 395 aaKnown RBP13.76□□□□□ -0.21
RNF40-208ENST00000565995 ZSCAN31Q96LW9 406 aaPredicted RBP13.76□□□□□ -0.21
RNF40-208ENST00000565995 FIZ1Q96SL8 496 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 ST6GALNAC4Q9H4F1 302 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 ABCB6Q9NP58 842 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
RNF40-208ENST00000565995 UXTQ9UBK9 157 aaPredicted RBP13.76□□□□□ -0.21
RNF40-208ENST00000565995 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 TADA3O75528 432 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 ZNF252P-AS1Q0IIN9 211 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 MTF1Q14872 753 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 SH3PXD2AQ5TCZ1 1133 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 NAIF1Q69YI7 327 aaPredicted RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 ATP2A3Q93084 1043 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 ADAM33Q9BZ11 813 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 TMLHEQ9NVH6 421 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 DUS2Q9NX74 493 aaKnown RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 ABI2Q9NYB9 513 aaPredicted RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 GCNT4Q9P109 453 aa13.75□□□□□ -0.21
RNF40-208ENST00000565995 EVLQ9UI08 416 aaPredicted RBP13.75□□□□□ -0.21
RNF40-208ENST00000565995 ANKRD63C9JTQ0 380 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 TRAK2O60296 914 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 ACOT2P49753 483 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 USP4Q13107 963 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 COL9A2Q14055 689 aaPredicted RBP13.74□□□□□ -0.21
RNF40-208ENST00000565995 SV2CQ496J9 727 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 RILPL1Q5EBL4 403 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 SLFN12LQ6IEE8 588 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 CRELD2Q6UXH1 353 aaPredicted RBP13.74□□□□□ -0.21
RNF40-208ENST00000565995 FAM184AQ8NB25 1140 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 FAM212AQ96EL1 285 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
RNF40-208ENST00000565995 AK8Q96MA6 479 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 SLC22A12Q96S37 553 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
RNF40-208ENST00000565995 K7EQS6 105 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 PRPF40AO75400 957 aaKnown RBP13.73□□□□□ -0.21
RNF40-208ENST00000565995 PFKLP17858 780 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 DGKEP52429 567 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
RNF40-208ENST00000565995 IRX4P78413 519 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 FOXC1Q12948 553 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 NR1H3Q13133 447 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
RNF40-208ENST00000565995 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 MYCT1Q8N699 235 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 LRRC15Q8TF66 581 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 CDK5RAP3Q96JB5 506 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 PLIN2Q99541 437 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 SCNM1Q9BWG6 230 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 AGO2Q9UKV8 859 aaKnown RBP13.73□□□□□ -0.21
RNF40-208ENST00000565995 MMP17Q9ULZ9 603 aa13.73□□□□□ -0.21
RNF40-208ENST00000565995 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 TRAV19A0A0A6YYK7 116 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 FAM221BA6H8Z2 402 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 SRRM3A6NNA2 597 aaPredicted RBP13.72□□□□□ -0.21
RNF40-208ENST00000565995 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 K7ENM7 598 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
RNF40-208ENST00000565995 OPRD1P41143 372 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 PNPLA4P41247 253 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 GPR15P49685 360 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 CDR1P51861 262 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 TSPY1Q01534 308 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 GAB4Q2WGN9 574 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 CFAP221Q4G0U5 840 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 SPDYCQ5MJ68 293 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 ADALQ6DHV7 355 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms