RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 RAD51CO43502 376 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 PAEPP09466 180 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 FAM163BP0C2L3 166 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 GZMAP12544 262 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 CD58P19256 250 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 CYP2C18P33260 490 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 FNTAP49354 379 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCNN1GP51170 649 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 DNA2P51530 1060 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 ZNF132P52740 706 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 CCL23P55773 120 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 GUCY1A3Q02108 690 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SOX4Q06945 474 aaPredicted RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 HLTFQ14527 1009 aaKnown RBP eCLIP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 CEP85LQ5SZL2 805 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 PPP1R2P3Q6NXS1 205 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCARA5Q6ZMJ2 495 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 TRIM72Q6ZMU5 477 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 GLYCTKQ8IVS8 523 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCLYQ96I15 445 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 TMBIM4Q9HC24 238 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 TMEM59LQ9UK28 342 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 PCDHB7Q9Y5E2 793 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
CNEP1R1-206ENST00000565556 PGRMC1O00264 195 aaKnown RBP9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 KIAA0355O15063 1070 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 TIMP1P01033 207 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 GNA15P30679 374 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 INCA1Q0VD86 236 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 TUSC3Q13454 348 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 NOMO2Q5JPE7 1267 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 CNKSR3Q6P9H4 555 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 DPH6Q7L8W6 267 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 LNX1Q8TBB1 728 aaPredicted RBP9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 ACTRT1Q8TDG2 376 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 SLC20A1Q8WUM9 679 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 DDX1Q92499 740 aaKnown RBP9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 CCT8L2Q96SF2 557 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 SMYD3Q9H7B4 428 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 ACTR5Q9H9F9 607 aaPredicted RBP9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 RNF19AQ9NV58 838 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 MIOSQ9NXC5 875 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 KIAA1257Q9ULG3 409 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 LRFN2Q9ULH4 789 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 BARX2Q9UMQ3 279 aaPredicted RBP9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 NENFQ9UMX5 172 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 SNX9Q9Y5X1 595 aa9.96□□□□□ -0.81
CNEP1R1-206ENST00000565556 E7EVH7 732 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC188H7C350 402 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 PODXLO00592 558 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 KCNK3O14649 394 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 PPEF2O14830 753 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 THAP12O43422 761 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 MED7O43513 233 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 HUS1O60921 280 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 RTN2O75298 545 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 CILPO75339 1184 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 KIF4AO95239 1232 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 MMEP08473 750 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 H2AFZP0C0S5 128 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 CHRNB2P17787 502 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 IBSPP21815 317 aaPredicted RBP9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 CDH8P55286 799 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 LILRA4P59901 499 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 FMO1Q01740 532 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 IKBKEQ14164 716 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 AGBL2Q5U5Z8 902 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 H2AFVQ71UI9 128 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 UNC93AQ86WB7 457 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 KLHL7Q8IXQ5 586 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 ABI1Q8IZP0 508 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 TMEM130Q8N3G9 435 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 TOP6BLQ8N6T0 577 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 APPL2Q8NEU8 664 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 TACO1Q9BSH4 297 aaKnown RBP9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 SDCBP2Q9H190 292 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 GOLGA2P5Q9HBQ8 144 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.82
CNEP1R1-206ENST00000565556 TET1Q8NFU7 2136 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 TTC3P53804 2025 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 GOLGA6L7A0A1B0GV03 622 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 ARHGEF37A1IGU5 675 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 POMCP01189 267 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 RAG1P15918 1043 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 HSD17B3P37058 310 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 RAP1GAPP47736 663 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 AFF1P51825 1210 aaKnown RBP9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 RAD23BP54727 409 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 ACTN3Q08043 901 aaPredicted RBP9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 UPP1Q16831 310 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 RNF187Q5TA31 235 aaPredicted RBP9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC121Q6ZUS5 278 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 LIMS2Q7Z4I7 341 aa9.95□□□□□ -0.82
CNEP1R1-206ENST00000565556 DEFB128Q7Z7B8 93 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms