RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CYFIP2Q96F07 1278 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 ZSWIM1Q9BR11 485 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 PAAF1Q9BRP4 392 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 TRIM10Q9UDY6 481 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 TFR2Q9UP52 801 aa20.24■□□□□ 0.83
CSPG4P13-201ENST00000565545 TRANK1O15050 2925 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 TRAPPC3O43617 180 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 TYMPP19971 482 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 KCNA5P22460 613 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 ZNF569Q5MCW4 686 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 WSCD1Q658N2 575 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 LCLAT1Q6UWP7 414 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 CD300LGQ6UXG3 332 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 RHOT2Q8IXI1 618 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 FBXO22Q8NEZ5 403 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 RFFLQ8WZ73 363 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 ALS2CR12Q96Q35 445 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 COLEC11Q9BWP8 271 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 CACNG4Q9UBN1 327 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 DUSP10Q9Y6W6 482 aa20.23■□□□□ 0.83
CSPG4P13-201ENST00000565545 MACROD2A1Z1Q3 448 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 FAM86C2PA6NEL3 165 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 TBKBP1A7MCY6 615 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 O00370 1275 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 ALDH2P05091 517 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 NAA35Q5VZE5 725 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 SYT10Q6XYQ8 523 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 ACOT1Q86TX2 421 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 MCOLN2Q8IZK6 566 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 MSANTD4Q8NCY6 345 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 KHSRPQ92945 711 aaKnown RBP eCLIP20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 TOP1MTQ969P6 601 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 C17orf80Q9BSJ5 609 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 IRX2Q9BZI1 471 aaPredicted RBP20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 NRDE2Q9H7Z3 1164 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 DNAI1Q9UI46 699 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 ARIH1Q9Y4X5 557 aaPredicted RBP20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 PAXBP1Q9Y5B6 917 aa20.22■□□□□ 0.83
CSPG4P13-201ENST00000565545 XIRP2A4UGR9 3374 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CARNS1A5YM72 827 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 GPR37L1O60883 481 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 DGKIO75912 1065 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 KIF4AO95239 1232 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CYP1A2P05177 515 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CALB1P05937 261 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 SETSIPP0DME0 302 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 ABCB4P21439 1286 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 PCSK1P29120 753 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CASQ1P31415 396 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 SSTR3P32745 418 aaPredicted RBP20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 OR1G1P47890 313 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 HADHBP55084 474 aaKnown RBP20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 NAP1L1P55209 391 aaKnown RBP20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 LEXMQ3ZCV2 418 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 LIN9Q5TKA1 542 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 GJD3Q8N144 294 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 UBE2Q2Q8WVN8 375 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CPA5Q8WXQ8 436 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 THAP2Q9H0W7 228 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 AVENQ9NQS1 362 aaPredicted RBP20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 PCDHB8Q9UN66 801 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 NME7Q9Y5B8 376 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 MYH10P35580 1976 aa20.21■□□□□ 0.83
CSPG4P13-201ENST00000565545 REV3LO60673 3130 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PI4K2BG5E9Z4 385 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 MTA2O94776 668 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 MICAL2O94851 1124 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 CFHP08603 1231 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PDGFRBP09619 1106 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 IGFBP6P24592 240 aaPredicted RBP20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 LMO2P25791 158 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 ORC1Q13415 861 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PTPROQ16827 1216 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 MON1BQ7L1V2 547 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PASD1Q8IV76 773 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 SLC35F6Q8N357 371 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 ZNF653Q96CK0 615 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 MIS12Q9H081 205 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 DDX43Q9NXZ2 648 aaKnown RBP20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 ADAM22Q9P0K1 906 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 UVRAGQ9P2Y5 699 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 HESX1Q9UBX0 185 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 CDH9Q9ULB4 789 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 FAN1Q9Y2M0 1017 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 PCDHGC5Q9Y5F6 944 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 TSC2P49815 1807 aa20.2■□□□□ 0.82
CSPG4P13-201ENST00000565545 M0QYV0 167 aa20.19■□□□□ 0.82
CSPG4P13-201ENST00000565545 SYN3O14994 580 aa20.19■□□□□ 0.82
CSPG4P13-201ENST00000565545 B4GALT3O60512 393 aa20.19■□□□□ 0.82
CSPG4P13-201ENST00000565545 TADA2AO75478 443 aa20.19■□□□□ 0.82
CSPG4P13-201ENST00000565545 MOCS3O95396 460 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms