RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	GPR162	Q16538	588 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	PDK4	Q16654	411 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	CAPN12	Q6ZSI9	719 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	CENPU	Q71F23	418 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	POLN	Q7Z5Q5	900 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	NCAPG2	Q86XI2	1143 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	DNER	Q8NFT8	737 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	PRPF31	Q8WWY3	499 aa	Known RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	MAF1	Q9H063	256 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	HOXC10	Q9NYD6	342 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SLC24A2	Q9UI40	661 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SMG5	Q9UPR3	1016 aa	Known RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SGK1	O00141	431 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	MAF	O75444	373 aa	Predicted RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	FARP2	O94887	1054 aa	Predicted RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	IFNB1	P01574	187 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	FGFR1	P11362	822 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	KRT15	P19012	456 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	ELF1	P32519	619 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	RFC1	P35251	1148 aa	Predicted RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	GDF10	P55107	478 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SGSM1	Q2NKQ1	1148 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SH3D19	Q5HYK7	790 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	EFHC2	Q5JST6	749 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	LBX2	Q6XYB7	198 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	ZBTB33	Q86T24	672 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	ERICH1	Q86X53	443 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	KIAA0319L	Q8IZA0	1049 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	UTP4	Q969X6	686 aa	Known RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	OPTN	Q96CV9	577 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	SMC6	Q96SB8	1091 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	WDR83	Q9BRX9	315 aa	Known RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	MAK16	Q9BXY0	300 aa	Known RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	XYLT2	Q9H1B5	865 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507	CHKB	Q9Y259	395 aa		13.84	□□□□□ -0.19
SCAPER-215	ENST00000565507		A0A1B0GUA9	196 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	EDF1	O60869	148 aa	Known RBP	13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	IL1R2	P27930	398 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	ASPA	P45381	313 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	PLCB3	Q01970	1234 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	PTPN20	Q4JDL3	420 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	MSS51	Q4VC12	460 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	ANKRD22	Q5VYY1	191 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	GIMAP7	Q8NHV1	300 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	ACO2	Q99798	780 aa	Known RBP	13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	ADAM33	Q9BZ11	813 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	MYLK2	Q9H1R3	596 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	PPCS	Q9HAB8	311 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	TJP2	Q9UDY2	1190 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	CYTH4	Q9UIA0	394 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	RABGEF1	Q9UJ41	708 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	CPSF3	Q9UKF6	684 aa	Known RBP	13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	EFR3B	Q9Y2G0	817 aa		13.83	□□□□□ -0.19
SCAPER-215	ENST00000565507	GOLGA8S	H3BPF8	625 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	GOLGA8M	H3BSY2	632 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	LRCH4	O75427	683 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	CNMD	O75829	334 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	TAZ	Q16635	292 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	DUOXA2	Q1HG44	320 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	ACTL9	Q8TC94	416 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	CPT1B	Q92523	772 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	THOC1	Q96FV9	657 aa	Known RBP	13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	C10orf88	Q9H8K7	445 aa		13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.83	□□□□□ -0.2
SCAPER-215	ENST00000565507	LOC102724159	A0A0B4J2E5	919 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	ANP32D	O95626	131 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	HOXC6	P09630	235 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	CYP2C8	P10632	490 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	CA4	P22748	312 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	EFNA5	P52803	228 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	OTUD4	Q01804	1114 aa	Known RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	PWP2	Q15269	919 aa	Known RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	HIF1A	Q16665	826 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	FNBP1L	Q5T0N5	605 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	DENND1B	Q6P3S1	775 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	ANKMY2	Q8IV38	441 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	NAT8L	Q8N9F0	302 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	JOSD2	Q8TAC2	188 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	MRRF	Q96E11	262 aa	Known RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	TCHP	Q9BT92	498 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	DHRS4	Q9BTZ2	278 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	MRPL4	Q9BYD3	311 aa	Known RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	PHACTR1	Q9C0D0	580 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	NRBP2	Q9NSY0	501 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	FETUB	Q9UGM5	382 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	STK38L	Q9Y2H1	464 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	USH1C	Q9Y6N9	552 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507		A0A0G2JLL6	359 aa	Predicted RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	SOWAHB	A6NEL2	793 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	SIGLEC16	A6NMB1	481 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	OGT	O15294	1046 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	IREB2	P48200	963 aa	Known RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	CTCF	P49711	727 aa	Predicted RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	STAT5B	P51692	787 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	SMTNL2	Q2TAL5	461 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	KCNT1	Q5JUK3	1230 aa		13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.82	□□□□□ -0.2
SCAPER-215	ENST00000565507	SCARA5	Q6ZMJ2	495 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms