RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CRABP2P29373 138 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 TGFB2P61812 414 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 FMO1Q01740 532 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 PLOD1Q02809 727 aaPredicted RBP17.08■□□□□ 0.32
LINC00554-201ENST00000564841 Q4G0T1 1027 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 RBM44Q6ZP01 1051 aaKnown RBP17.08■□□□□ 0.32
LINC00554-201ENST00000564841 SCUBE1Q8IWY4 988 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 DHX38Q92620 1227 aaKnown RBP17.08■□□□□ 0.32
LINC00554-201ENST00000564841 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.32
LINC00554-201ENST00000564841 HPCAP84074 193 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 ULK2Q8IYT8 1036 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 PPP2R3CQ969Q6 453 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 OXNAD1Q96HP4 312 aaPredicted RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 OSBPL8Q9BZF1 889 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 NFIBO00712 420 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 SLITRK3O94933 977 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 FDX1P10109 184 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 HOXA7P31268 230 aaPredicted RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 TFDP1Q14186 410 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 HSF5Q4G112 596 aaPredicted RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 AGPAT3Q9NRZ7 376 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 NOCTQ9UK39 431 aaKnown RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
LINC00554-201ENST00000564841 ARP10275 920 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 BCRP11274 1271 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 PEX2P28328 305 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 PCSK6P29122 969 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 MAPK4P31152 587 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 OR6Y1Q8NGX8 325 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
LINC00554-201ENST00000564841 VILLO15195 856 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ADSSP30520 456 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ABCD1P33897 745 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 BFSP1Q12934 665 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 MAP7Q14244 749 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ANGEL2Q5VTE6 544 aaKnown RBP17.06■□□□□ 0.32
LINC00554-201ENST00000564841 FBXL19Q6PCT2 694 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 KREMEN1Q96MU8 473 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 IWS1Q96ST2 819 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 SHCBP1LQ9BZQ2 653 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 PPARGC1AQ9UBK2 798 aaKnown RBP17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ADAMTS6Q9UKP5 1117 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ATP6V1B1P15313 513 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 MAP3K10Q02779 954 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 AP3B2Q13367 1082 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 MED21Q13503 144 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ALCAMQ13740 583 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 NLRX1Q86UT6 975 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 STKLD1Q8NE28 680 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 MTBPQ96DY7 904 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 FAM111AQ96PZ2 611 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 ARHGEF38Q9NXL2 777 aa17.06■□□□□ 0.32
LINC00554-201ENST00000564841 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 GPX6P59796 221 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 MPP3Q13368 585 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ZCCHC9Q8N567 271 aaKnown RBP17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CCDC110Q8TBZ0 833 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CCDC124Q96CT7 223 aaKnown RBP17.05■□□□□ 0.32
LINC00554-201ENST00000564841 TTC25Q96NG3 672 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 OLFM3Q96PB7 478 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 MECRQ9BV79 373 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ZNF541Q9H0D2 1346 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 BOLA2-SMG1P6H3BVE0 249 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CYP1A2P05177 515 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 AP2B1P63010 937 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 PDE1BQ01064 536 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 GPS1Q13098 491 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ACSF2Q96CM8 615 aaPredicted RBP17.05■□□□□ 0.32
LINC00554-201ENST00000564841 HSPBAP1Q96EW2 488 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 HNRNPCL1O60812 293 aaKnown RBP17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ZNF189O75820 626 aaPredicted RBP17.05■□□□□ 0.32
LINC00554-201ENST00000564841 VCLP18206 1134 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 KLRC2P26717 231 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 TAS2R40P59535 323 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ACTR3P61158 418 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 SLC25A3Q00325 362 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CAV1Q03135 178 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 NME8Q8N427 588 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CCDC89Q8N998 374 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 USP29Q9HBJ7 922 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ZNF711Q9Y462 761 aa17.05■□□□□ 0.32
LINC00554-201ENST00000564841 ARHGAP42A6NI28 874 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms