RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ADRA1DP25100 572 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 PSMA2P25787 234 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 DENND1BQ6P3S1 775 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 PRPF31Q8WWY3 499 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 PCYT2Q99447 389 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 KLF6Q99612 283 aaPredicted RBP16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
GTF3C1-205ENST00000564747 CLGNO14967 610 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 PEX10O60683 326 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 LRCH4O75427 683 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 DCTN3O75935 186 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 ATP2A2P16615 1042 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 EIF4BP23588 611 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 RPL22P35268 128 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 TFAMQ00059 246 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC25A11Q02978 314 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 STXBP2Q15833 593 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 PLEKHG4Q58EX7 1191 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 BZW1Q7L1Q6 419 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 PPIL6Q8IXY8 311 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 NAT8LQ8N9F0 302 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC7A6OSQ96CW6 309 aaPredicted RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 WRNIP1Q96S55 665 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF518BQ9C0D4 1074 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 NKX1-2Q9UD57 310 aaPredicted RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 CYTH4Q9UIA0 394 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 CCDC189A1A4V9 331 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 MSCO60682 206 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 ATP5HO75947 161 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 KRT3P12035 628 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 HIRAP54198 1017 aaPredicted RBP16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 NRLP54845 237 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 RASA2Q15283 850 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 SGSM1Q2NKQ1 1148 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 EMC1Q8N766 993 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 FBXO36Q8NEA4 188 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 PAFAH2Q99487 392 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 NPHS2Q9NP85 383 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 CYLDQ9NQC7 956 aa16.25■□□□□ 0.19
GTF3C1-205ENST00000564747 CDC25CP30307 473 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 ARL4CP56559 192 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TAP1Q03518 808 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TRPC3Q13507 836 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 PARP6Q2NL67 630 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 PCGF5Q86SE9 256 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 UNC45BQ8IWX7 931 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TBC1D10AQ9BXI6 508 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 PICK1Q9NRD5 415 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 NUMBLQ9Y6R0 609 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 SKAP2O75563 359 aaPredicted RBP16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TOM1L1O75674 476 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TAF1BQ53T94 588 aaPredicted RBP16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 ADGRD1Q6QNK2 874 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 ZPBP2Q6X784 338 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TCP10LQ8TDR4 215 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC24A3Q9HC58 644 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 PCSK1NQ9UHG2 260 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 PCDHGC3Q9UN70 934 aa16.24■□□□□ 0.19
GTF3C1-205ENST00000564747 TMEM63AO94886 807 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 CD19P15391 556 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 GM2AP17900 193 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 KDELR1P24390 212 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ASPAP45381 313 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 AP3M2P53677 418 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF280AP59817 542 aaPredicted RBP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 OVGP1Q12889 678 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ORC1Q13415 861 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 TAF5Q15542 800 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 BBS9Q3SYG4 887 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 MTDHQ86UE4 582 aaKnown RBP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 CCDC125Q86Z20 511 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ZNF276Q8N554 614 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ATP11CQ8NB49 1132 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 PPCSQ9HAB8 311 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 AS3MTQ9HBK9 375 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 SLC17A7Q9P2U7 560 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 DCTN4Q9UJW0 460 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
GTF3C1-205ENST00000564747 IGKV6D-21A0A0A0MT36 114 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms