RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 HPCAL4Q9UM19 191 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 YBX2Q9Y2T7 364 aaKnown RBP7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CEP83Q9Y592 693 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PCDHB7Q9Y5E2 793 aa7.88□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FNDC1Q4ZHG4 1894 aaPredicted RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZFHX4Q86UP3 3567 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 C9IYK1 514 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GJB5O95377 273 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NPTXRO95502 500 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CALCAP01258 141 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CALB1P05937 261 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CA3P07451 260 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GLI1P08151 1106 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NFICP08651 508 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FGFR1P11362 822 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 P4HA1P13674 534 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ARF4P18085 180 aaPredicted RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CD58P19256 250 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AXLP30530 894 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AARSP49588 968 aaKnown RBP eCLIP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GATMP50440 423 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RWDD2BP57060 319 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MRPS25P82663 173 aaKnown RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 AMHR2Q16671 573 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF667Q5HYK9 610 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SPOUT1Q5T280 376 aaKnown RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PPP2R2DQ66LE6 453 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NOTUMQ6P988 496 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SCARA5Q6ZMJ2 495 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MON1BQ7L1V2 547 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MAATS1Q7Z4T9 603 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ECHDC2Q86YB7 292 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PHF13Q86YI8 300 aaPredicted RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PASD1Q8IV76 773 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CEP120Q8N960 986 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CASKIN2Q8WXE0 1202 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LPPQ93052 612 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TOP1MTQ969P6 601 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAXDC2Q96IV6 333 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RUNDC3BQ96NL0 473 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RUFY1Q96T51 708 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RAD9AQ99638 391 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 EIF2AQ9BY44 585 aaKnown RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DDX47Q9H0S4 455 aaKnown RBP7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RAB17Q9H0T7 212 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ASB7Q9H672 318 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CHST12Q9NRB3 414 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM114A2Q9NRY5 505 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CISHQ9NSE2 258 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM105AQ9NUU6 356 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ADAM22Q9P0K1 906 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MTUS1Q9ULD2 1270 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PCDHA11Q9Y5I1 949 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 NLRC5Q86WI3 1866 aa7.87□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GOLGA6BA6NDN3 693 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 FAM187AA6NFU0 413 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TBKBP1A7MCY6 615 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LACTBL1A8MY62 500 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 H3BQF6 201 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MYO1FO00160 1098 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 POLR3GO15318 223 aaPredicted RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 SART1O43290 800 aaKnown RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MED7O43513 233 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HSF2BPO75031 334 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PHF2O75151 1096 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 KRT19P08727 400 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ITGA4P13612 1032 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RRM1P23921 792 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HOXA11P31270 313 aaPredicted RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ATICP31939 592 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CHRNA3P32297 505 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ASPAP45381 313 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MARCKSL1P49006 195 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 RAB27AP51159 221 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 DHX34Q14147 1143 aaKnown RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 BTG3Q14201 252 aaPredicted RBP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 HLTFQ14527 1009 aaKnown RBP eCLIP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TMEM132DQ14C87 1099 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 PCBP1Q15365 356 aaKnown RBP eCLIP7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 JADE1Q6IE81 842 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MMS22LQ6ZRQ5 1243 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CD302Q8IX05 232 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ABI1Q8IZP0 508 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 TMEM35BQ8NCS4 154 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ADAMTS19Q8TE59 1207 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 MAIP1Q8WWC4 291 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 IFT81Q8WYA0 676 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 KRT35Q92764 455 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CD101Q93033 1021 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 CYFIP2Q96F07 1278 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 GDAP1L1Q96MZ0 367 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 LRFN3Q9BTN0 628 aa7.86□□□□□ -1.15
MAP1LC3B-205ENST00000564638 ZNF518BQ9C0D4 1074 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms