RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 BIRC3Q13489 604 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 TAF12Q16514 161 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 CEP135Q66GS9 1140 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 ARID3BQ8IVW6 561 aaPredicted RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 CCDC47Q96A33 483 aaKnown RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 DPEP3Q9H4B8 488 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 BRD9Q9H8M2 597 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 ABCB6Q9NP58 842 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 NXF1Q9UBU9 619 aaKnown RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
HERC2-206ENST00000564519 MAGED2Q9UNF1 606 aaPredicted RBP13.57□□□□□ -0.24
HERC2-206ENST00000564519 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
HERC2-206ENST00000564519 SLC38A8A6NNN8 435 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 NCAM2O15394 837 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 TACC1O75410 805 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 TADA3O75528 432 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 AKAP3O75969 853 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
HERC2-206ENST00000564519 F11P03951 625 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 GNL1P36915 607 aaPredicted RBP13.56□□□□□ -0.24
HERC2-206ENST00000564519 RAP1GAPP47736 663 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 CDH8P55286 799 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 NLRP12P59046 1061 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 TNNC1P63316 161 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 PUM1Q14671 1186 aaKnown RBP eCLIP13.56□□□□□ -0.24
HERC2-206ENST00000564519 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 TPRG1Q6ZUI0 275 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 MFSD6LQ8IWD5 586 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 SCN4BQ8IWT1 228 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
HERC2-206ENST00000564519 OR6B3Q8NGW1 331 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 RMDN1Q96DB5 314 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 SLC46A2Q9BY10 475 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 SDCBP2Q9H190 292 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 TASP1Q9H6P5 420 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 NCDNQ9UBB6 729 aa13.56□□□□□ -0.24
HERC2-206ENST00000564519 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 ARNTLO00327 626 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 NOL4O94818 638 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 FGF19O95750 216 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 BDNFP23560 247 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 NR2F2P24468 414 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 TARSP26639 723 aaKnown RBP13.55□□□□□ -0.24
HERC2-206ENST00000564519 CDC25CP30307 473 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 ATICP31939 592 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 MAGEA9P43362 315 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 AP3M2P53677 418 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
HERC2-206ENST00000564519 CYP27A1Q02318 531 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 NCOA4Q13772 614 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 NFIL3Q16649 462 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 ZACNQ401N2 412 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 MDH1BQ5I0G3 518 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 SCARA5Q6ZMJ2 495 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 SV2AQ7L0J3 742 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 DEPDC1BQ8WUY9 529 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 DNASE1L2Q92874 299 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 SYAP1Q96A49 352 aaPredicted RBP13.55□□□□□ -0.24
HERC2-206ENST00000564519 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
HERC2-206ENST00000564519 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 LTB4R2Q9NPC1 389 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.55□□□□□ -0.24
HERC2-206ENST00000564519 MAGEC2Q9UBF1 373 aaPredicted RBP13.55□□□□□ -0.24
HERC2-206ENST00000564519 FRMD4BQ9Y2L6 1034 aa13.55□□□□□ -0.24
HERC2-206ENST00000564519 ZNF263O14978 683 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 GADD45BO75293 160 aaPredicted RBP13.54□□□□□ -0.24
HERC2-206ENST00000564519 CLSTN1O94985 981 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 KIF20AO95235 890 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 TRIM49P0CI25 452 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 TRIM49CP0CI26 452 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 CSH1P0DML2 217 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 CSH2P0DML3 217 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 MAGEA11P43364 429 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 CSTF1Q05048 431 aaKnown RBP13.54□□□□□ -0.24
HERC2-206ENST00000564519 FAM160A1Q05DH4 1040 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 ADAM9Q13443 819 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
HERC2-206ENST00000564519 TXNDC8Q6A555 127 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms