RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LRRC3BQ96PB8 259 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 SMG9Q9H0W8 520 aaKnown RBP21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 SNX25Q9H3E2 840 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 DENND4CQ5VZ89 1909 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 FAM170BA6NMN3 283 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 SLC38A8A6NNN8 435 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 ZNF263O14978 683 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 TACC1O75410 805 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 CLSTN1O94985 981 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 VNN1O95497 513 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 STAU1O95793 577 aaKnown RBP21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 F11P03951 625 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 TARSP26639 723 aaKnown RBP21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 CLDN10P78369 228 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 PNOCQ13519 176 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 KCNB1Q14721 858 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 MDH1BQ5I0G3 518 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 C4orf50Q6ZRC1 276 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 YAF2Q8IY57 180 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 FMR1NBQ8N0W7 255 aaPredicted RBP21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 OR6B3Q8NGW1 331 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 SLC46A2Q9BY10 475 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 DPEP3Q9H4B8 488 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 SMYD3Q9H7B4 428 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 TRAF3IP3Q9Y228 551 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 PTPRDP23468 1912 aa21.35■■□□□ 1.01
SHCBP1-203ENST00000564272 ARNTLO00327 626 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 DPYSL4O14531 572 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 TADA3O75528 432 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 NOL4O94818 638 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 KIF20AO95235 890 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 C4BPAP04003 597 aaKnown RBP21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 ATICP31939 592 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 GNL1P36915 607 aaPredicted RBP21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 MAGEA11P43364 429 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 AP3M2P53677 418 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 CYP27A1Q02318 531 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 FCHO2Q0JRZ9 810 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 NCOA4Q13772 614 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 ZNF699Q32M78 642 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 SCARA5Q6ZMJ2 495 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 ZNF852Q6ZMS4 543 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 SMYD4Q8IYR2 804 aaPredicted RBP21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 PCED1BQ96HM7 432 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 MAGEC2Q9UBF1 373 aaPredicted RBP21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 FRMD4BQ9Y2L6 1034 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 PIAS3Q9Y6X2 628 aa21.34■■□□□ 1.01
SHCBP1-203ENST00000564272 GOLGA6L4A6NEF3 574 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 BDNFP23560 247 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 NR2F2P24468 414 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 RAP1GAPP47736 663 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 MAPRE1Q15691 268 aaKnown RBP21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 C1orf220Q5T0J3 134 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 TXNDC8Q6A555 127 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 GUF1Q8N442 669 aaKnown RBP21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 MAB21L3Q8N8X9 362 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 TMC2Q8TDI7 906 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 ZFYVE19Q96K21 471 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 TRPV5Q9NQA5 729 aa21.33■■□□□ 1.01
SHCBP1-203ENST00000564272 CHADO15335 359 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 WEE1P30291 646 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 NFIL3Q16649 462 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 ZACNQ401N2 412 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 FRMD5Q7Z6J6 570 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 CMTM8Q8IZV2 173 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 MYCBPAPQ8TBZ2 947 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 TRMT2BQ96GJ1 504 aaKnown RBP21.32■■□□□ 1
SHCBP1-203ENST00000564272 CCDC34Q96HJ3 373 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 BCO2Q9BYV7 579 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 OSBPL6Q9BZF3 934 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 VRTNQ9H8Y1 702 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 OBP2AQ9NY56 170 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 NDRG2Q9UN36 371 aaKnown RBP21.32■■□□□ 1
SHCBP1-203ENST00000564272 F5P12259 2224 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 PATJQ8NI35 1801 aa21.32■■□□□ 1
SHCBP1-203ENST00000564272 KIF26AQ9ULI4 1882 aaPredicted RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 A8MXQ7 604 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 AKAP3O75969 853 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 FAM163BP0C2L3 166 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 PTPN1P18031 435 aaKnown RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 GRIK1P39086 918 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 NBL1P41271 181 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 CDH8P55286 799 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 ZCWPW2Q504Y3 356 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 ZNF667Q5HYK9 610 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 VSTM1Q6UX27 236 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 C1orf210Q8IVY1 113 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 ENGASEQ8NFI3 743 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 TTC8Q8TAM2 541 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 BPIFB1Q8TDL5 484 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 CSGALNACT1Q8TDX6 532 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 MRPS31Q92665 395 aaKnown RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 ERCC4Q92889 916 aaPredicted RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 MYRFLQ96LU7 910 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 SDCBP2Q9H190 292 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 UXTQ9UBK9 157 aaPredicted RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 CCL26Q9Y258 94 aa21.31■■□□□ 1
SHCBP1-203ENST00000564272 MRPS17Q9Y2R5 130 aaKnown RBP21.31■■□□□ 1
SHCBP1-203ENST00000564272 GREB1Q4ZG55 1949 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms