RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ZNF174Q15697 407 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 MGAT5BQ3V5L5 792 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 PEAR1Q5VY43 1037 aaPredicted RBP17.22■□□□□ 0.35
RNF40-205ENST00000563909 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 OVOS1Q6IE37 1185 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 GIPC2Q8TF65 315 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 CAPN10Q9HC96 672 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 HSFX1Q9UBD0 423 aa17.22■□□□□ 0.35
RNF40-205ENST00000563909 TNRC6BQ9UPQ9 1833 aaKnown RBP17.21■□□□□ 0.35
RNF40-205ENST00000563909 K7EQS6 105 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 WNT7AO00755 349 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 ARHGAP33O14559 1287 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 HNRNPLP14866 589 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF40-205ENST00000563909 TOB1P50616 345 aaPredicted RBP17.21■□□□□ 0.35
RNF40-205ENST00000563909 TMEM92Q6UXU6 159 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 ATP2A3Q93084 1043 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.35
RNF40-205ENST00000563909 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF40-205ENST00000563909 DKK4Q9UBT3 224 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 APOBEC2Q9Y235 224 aaKnown RBP17.21■□□□□ 0.35
RNF40-205ENST00000563909 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 KIAA1549LQ6ZVL6 1849 aa17.21■□□□□ 0.35
RNF40-205ENST00000563909 MYO16Q9Y6X6 1858 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 ARHGEF35A5YM69 484 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 MED24O75448 989 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 MCF2P10911 925 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
RNF40-205ENST00000563909 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.34
RNF40-205ENST00000563909 NLRP12P59046 1061 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 SLC14A1Q13336 389 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 MTF1Q14872 753 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 TOGARAM2Q6ZUX3 1019 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 SLCO6A1Q86UG4 719 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 DEFB119Q8N690 84 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 TARS2Q9BW92 718 aaKnown RBP17.2■□□□□ 0.34
RNF40-205ENST00000563909 POLMQ9NP87 494 aaPredicted RBP17.2■□□□□ 0.34
RNF40-205ENST00000563909 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.2■□□□□ 0.34
RNF40-205ENST00000563909 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
RNF40-205ENST00000563909 A0A087WV48 116 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 F13A1P00488 732 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 F11P03951 625 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 IFNAR2P48551 515 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 SPAG1Q07617 926 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 CYP4F3Q08477 520 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 NR1H3Q13133 447 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 DMP1Q13316 513 aaPredicted RBP17.19■□□□□ 0.34
RNF40-205ENST00000563909 BYSLQ13895 437 aaKnown RBP17.19■□□□□ 0.34
RNF40-205ENST00000563909 NBR1Q14596 966 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 SLC10A6Q3KNW5 377 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 SLC39A12Q504Y0 691 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 MON1AQ86VX9 555 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 NAXDQ8IW45 347 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
RNF40-205ENST00000563909 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
RNF40-205ENST00000563909 MYO18BQ8IUG5 2567 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 LAD1O00515 517 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 ATXN7O15265 892 aaPredicted RBP17.18■□□□□ 0.34
RNF40-205ENST00000563909 AP5Z1O43299 807 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 SYPP08247 313 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
RNF40-205ENST00000563909 NUCB2P80303 420 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 PKP1Q13835 747 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 ZNF268Q14587 947 aaPredicted RBP17.18■□□□□ 0.34
RNF40-205ENST00000563909 EML3Q32P44 896 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 SEZ6Q53EL9 994 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
RNF40-205ENST00000563909 SCUBE3Q8IX30 993 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 PGBD3Q8N328 593 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 ALLCQ8N6M5 410 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 HMGB4Q8WW32 186 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
RNF40-205ENST00000563909 MRPS31Q92665 395 aaKnown RBP17.18■□□□□ 0.34
RNF40-205ENST00000563909 STK24Q9Y6E0 443 aa17.18■□□□□ 0.34
RNF40-205ENST00000563909 PTPRDP23468 1912 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 BMP15O95972 392 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 TYMPP19971 482 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 LRPAP1P30533 357 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 RPL6Q02878 288 aaKnown RBP17.17■□□□□ 0.34
RNF40-205ENST00000563909 MPZL3Q6UWV2 235 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 RABEPKQ7Z6M1 372 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 EFCAB13Q8IY85 973 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 TXNDC5Q8NBS9 432 aaKnown RBP17.17■□□□□ 0.34
RNF40-205ENST00000563909 OR10T2Q8NGX3 314 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 ERMNQ8TAM6 284 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 KIFAP3Q92845 792 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 SHROOM3Q8TF72 1996 aa17.17■□□□□ 0.34
RNF40-205ENST00000563909 TRABD2BA6NFA1 517 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 SGK1O00141 431 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 ABLIM1O14639 778 aa17.16■□□□□ 0.34
RNF40-205ENST00000563909 KLF8O95600 359 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms