RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 NCAM1P13591 858 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 GNLYP22749 145 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 AXLP30530 894 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 DUSP3P51452 185 aaPredicted RBP11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 IL9RQ01113 521 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 CEP55Q53EZ4 464 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 EMC10Q5UCC4 262 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 MFSD6Q6ZSS7 791 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 ESR2Q92731 530 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 PSMG2Q969U7 264 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 ACAP3Q96P50 834 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 CEP89Q96ST8 783 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 TMEM245Q9H330 911 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 FBXL5Q9UKA1 691 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 ASB3Q9Y575 518 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 CDRT15L2A8MXV6 281 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 MEIS1O00470 390 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 LAD1O00515 517 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 PTGESO14684 152 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 N4BP3O15049 544 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 B3GAT3O94766 335 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 KRT7P08729 469 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 RBMS1P29558 406 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 AVPR1AP37288 418 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 E2F1Q01094 437 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 PRKCEQ02156 737 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 MRPL58Q14197 206 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 GAB4Q2WGN9 574 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 DCAF12L1Q5VU92 463 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 DNAJB7Q7Z6W7 309 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 GATAD2AQ86YP4 633 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 SMAP1Q8IYB5 467 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 GALNT11Q8NCW6 608 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 TRIM6Q9C030 488 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 ZDHHC4Q9NPG8 344 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 DUS2Q9NX74 493 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 EIF2B4Q9UI10 523 aaKnown RBP11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 PCDHA10Q9Y5I2 948 aa11.75□□□□□ -0.53
HDGFL3-204ENST00000563790 A0A0A0MRY4 1105 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 A0A1B0GTQ1 180 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 SPDYE3A6NKU9 549 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 METTL12A8MUP2 240 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 H7C4K7 107 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 I3L4J1 428 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 MARCH6O60337 910 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 THP07101 528 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 CD6P30203 668 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 USP4Q13107 963 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 KCNAB2Q13303 367 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 MTF1Q14872 753 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 ZMYM1Q5SVZ6 1142 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 VPS53Q5VIR6 699 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 PADI6Q6TGC4 694 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 RSRC2Q7L4I2 434 aaKnown RBP11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 DEPDC7Q96QD5 511 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 UNKQ9C0B0 810 aaKnown RBP11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 WSB2Q9NYS7 404 aaPredicted RBP11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 PHTF1Q9UMS5 762 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
HDGFL3-204ENST00000563790 VPS4BO75351 444 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 ERLIN2O94905 339 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 CKMT2P17540 419 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 CDC25CP30307 473 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 CTSKP43235 329 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 GRIA4P48058 902 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 IFNAR2P48551 515 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 TEAD4Q15561 434 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 INF2Q27J81 1249 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 CLEC14AQ86T13 490 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 ZSCAN10Q96SZ4 725 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 IL21Q9HBE4 155 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 PARP2Q9UGN5 583 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 VPS4AQ9UN37 437 aa11.73□□□□□ -0.53
HDGFL3-204ENST00000563790 CUBNO60494 3623 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 NEDD4P46934 1319 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 A0A1W2PQF6 199 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 TSPAN1O60635 241 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 KAT7O95251 611 aa11.72□□□□□ -0.53
HDGFL3-204ENST00000563790 VNN2O95498 520 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms