RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ALOX15BO15296 676 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 WFS1O76024 890 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 FGFR1P11362 822 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 VHLP40337 213 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 MRPS35P82673 323 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 KLHL38Q2WGJ6 581 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 FAXCQ5TGI0 409 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 MCPH1Q8NEM0 835 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 SCG3Q8WXD2 468 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PRR11Q96HE9 360 aaPredicted RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 CADM1Q9BY67 442 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 SLC24A2Q9UI40 661 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 TELO2Q9Y4R8 837 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 H3BRJ5 948 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 MAP3K7O43318 606 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 CIB2O75838 187 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 LMNAP02545 664 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PYGBP11216 843 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PDCD2Q16342 344 aaPredicted RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 DBN1Q16643 649 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ZACNQ401N2 412 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 MSS51Q4VC12 460 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ARHGAP42A6NI28 874 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 COPEO14579 308 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF862O60290 1169 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 CYP1A1P04798 512 aaPredicted RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 CALB1P05937 261 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ASNSP08243 561 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 TUBP50607 506 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 GDF10P55107 478 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 EIF3EP60228 445 aaKnown RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 PPIL6Q8IXY8 311 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
ABCA3-203ENST00000563623 GBP5Q96PP8 586 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 MAD1L1Q9Y6D9 718 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
ABCA3-203ENST00000563623 IQANK1A0A1B0GTG1 560 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 C2CD2LO14523 706 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ZCCHC18P0CG32 403 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 KCNA3P22001 575 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 GARTP22102 1010 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 HSD17B4P51659 736 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 GPX6P59796 221 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 CDO1Q16878 200 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 LRRC36Q1X8D7 754 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RNASEH2BQ5TBB1 312 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RNF220Q5VTB9 566 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PLEKHA7Q6IQ23 1121 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 HIPK4Q8NE63 616 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 FAM151AQ8WW52 585 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PCDH9Q9HC56 1237 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SHOC2Q9UQ13 582 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 C10orf71Q711Q0 1435 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 F5H423 210 aaPredicted RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 MCF2LO15068 1137 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 DGAT1O75907 488 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PSAPP07602 524 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 NR3C2P08235 984 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 LAMB3Q13751 1172 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PTPRN2Q92932 1015 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ST6GALNAC4Q9H4F1 302 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 hCG_1818297A0A087WSY0 165 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 TCRBV7S3A2A0A539 114 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 FCHO1O14526 889 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RBP3P10745 1247 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 GNAZP19086 355 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RPL22P35268 128 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ELK3P41970 407 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ALDH18A1P54886 795 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 C1orf228Q6PIY5 440 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 CDR2LQ86X02 465 aaPredicted RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ARHGAP24Q8N264 748 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SLC25A41Q8N5S1 370 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 ARL10Q8N8L6 244 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 CLEC4DQ8WXI8 215 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 FAF2Q96CS3 445 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 MIPEPQ99797 713 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms