RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 C1GALT1C1Q96EU7 318 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 C1QTNF7Q9BXJ2 289 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 STAP2Q9UGK3 403 aa4.23□□□□□ -1.73
HMGB1P33-201ENST00000563485 hCG_1984214I3L0E3 225 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 SMIM22K7EJ46 135 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 QSOX1O00391 747 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 AP1G1O43747 822 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 ALDH1L1O75891 902 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 JTBO76095 146 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 LATS1O95835 1130 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 CT47B1P0C2W7 299 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 ENGP17813 658 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 VIPR2P41587 438 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 ATXN1P54253 815 aaKnown RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 EEFSECP57772 596 aaKnown RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 RAB1AP62820 205 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 AMOTQ4VCS5 1084 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 ZNF66Q6ZN08 573 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 WDR53Q7Z5U6 358 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 DIS3LQ8TF46 1054 aaKnown RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 SCARB1Q8WTV0 552 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 GLG1Q92896 1179 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 MRGPRX1Q96LB2 322 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 MACROD1Q9BQ69 325 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 RHOBTB2Q9BYZ6 727 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 GLOD4Q9HC38 313 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 DUSP22Q9NRW4 184 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 XPR1Q9UBH6 696 aa4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 NDRG4Q9ULP0 352 aaKnown RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
HMGB1P33-201ENST00000563485 ANKRD62A6NC57 917 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 TISP43B9A030 160 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 ONECUT2O95948 504 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 PRR35P0CG20 571 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 PDE1AP54750 535 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 UCP3P55916 312 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 CYP4F2P78329 520 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 MCL1Q07820 350 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 PIN1Q13526 163 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 MTX3Q5HYI7 312 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 PCID2Q5JVF3 399 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 PRAMEF17Q5VTA0 474 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF626Q68DY1 528 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 NAPRTQ6XQN6 538 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF804AQ7Z570 1209 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 LRRC71Q8N4P6 559 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 STAG1Q8WVM7 1258 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 R3HDM4Q96D70 268 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 MOGAT1Q96PD6 335 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 P2RX7Q99572 595 aaKnown RBP4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 RTFDC1Q9BY42 306 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 CNNM1Q9NRU3 951 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 SHOC2Q9UQ13 582 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 SH2B3Q9UQQ2 575 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 MED16Q9Y2X0 877 aa4.21□□□□□ -1.74
HMGB1P33-201ENST00000563485 A1L4Q6 167 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 ERC2O15083 957 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 CSF1RP07333 972 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 HTR1BP28222 390 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 EPHB2P29323 1055 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 MPGP29372 298 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC11A2P49281 568 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 SSBP2P81877 361 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 MYO1EQ12965 1108 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 E2F2Q14209 437 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 FGL2Q14314 439 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 TTF1Q15361 905 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZIK1Q3SY52 487 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 EPHA10Q5JZY3 1008 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 DENND1CQ8IV53 801 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 PPP1R35Q8TAP8 253 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 XAGE5Q8WWM1 108 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 NAF1Q96HR8 494 aaKnown RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 LRGUKQ96M69 825 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 NT5C1BQ96P26 610 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 SH2D3AQ9BRG2 576 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 FSD1LQ9BXM9 530 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 CXorf36Q9H7Y0 433 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 TYW1Q9NV66 732 aaKnown RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 GABBR1Q9UBS5 961 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF180Q9UJW8 692 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 PNMA8BQ9ULN7 279 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 ADAMTS5Q9UNA0 930 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 TMX2Q9Y320 296 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF804BA4D1E1 1349 aa4.2□□□□□ -1.74
HMGB1P33-201ENST00000563485 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 A0A088AWK7 358 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 UBXN7O94888 489 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 CYP2D6P10635 497 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 NPR1P16066 1061 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 NCLP19338 710 aaKnown RBP4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 ADORA2AP29274 412 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 PDE6CP51160 858 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 TUBA4AP68366 448 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC44A4Q53GD3 710 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 DEPDC1Q5TB30 811 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF425Q6IV72 752 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 B3GNT9Q6UX72 402 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 Q6ZWC4 215 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms