RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 TPRP12270 2363 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 EPG5Q9HCE0 2579 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 PTPRJQ12913 1337 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 SOBPA7XYQ1 873 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 GABRDO14764 452 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 HUS1O60921 280 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 PRPF6O94906 941 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 IDEP14735 1019 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 GALK1P51570 392 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 GRSF1Q12849 480 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 ZNF268Q14587 947 aaPredicted RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 LMBRD2Q68DH5 695 aaPredicted RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 GLIS3Q8NEA6 775 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 EZH1Q92800 747 aaPredicted RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 MYRFLQ96LU7 910 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 ITGA11Q9UKX5 1188 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 SNX9Q9Y5X1 595 aa18.04■□□□□ 0.48
HDGFL3-203ENST00000563404 AXIN1O15169 862 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 RNF40O75150 1001 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 LDHAP00338 332 aaKnown RBP18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 ADRB1P08588 477 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 KRT19P08727 400 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 SYT1P21579 422 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 GJA4P35212 333 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 RPL10AP62906 217 aaKnown RBP18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 MYL7Q01449 175 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 ZNF77Q15935 545 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 CCDC6Q16204 474 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 SOWAHAQ2M3V2 549 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 LIMS2Q7Z4I7 341 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 KBTBD6Q86V97 674 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 ADGRF2Q8IZF7 708 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 SYCP3Q8IZU3 236 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 TOP6BLQ8N6T0 577 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 GAB3Q8WWW8 586 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 USP28Q96RU2 1077 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 TRPC7Q9HCX4 862 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 PANK4Q9NVE7 773 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 ATG2BQ96BY7 2078 aa18.03■□□□□ 0.48
HDGFL3-203ENST00000563404 ZNF638Q14966 1978 aaKnown RBP18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 KMT2BQ9UMN6 2715 aaPredicted RBP18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 ACACBO00763 2458 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 ATP2C2O75185 946 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 TXLNAP40222 546 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 STAT6P42226 847 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 RAP1GAPP47736 663 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 RBP5P82980 135 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 USP4Q13107 963 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 MTF1Q14872 753 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 PDGFRLQ15198 375 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 SF3A2Q15428 464 aaKnown RBP18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 CFAP221Q4G0U5 840 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 PPM1JQ5JR12 505 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 RALGAPA1Q6GYQ0 2036 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 FAM171BQ6P995 826 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 CCDC73Q6ZRK6 1079 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 KBTBD7Q8WVZ9 684 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 HPS3Q969F9 1004 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 ARRDC1-AS1Q9H2J1 176 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 ECT2Q9H8V3 914 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 RXFP3Q9NSD7 469 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 GCNT4Q9P109 453 aa18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 UXTQ9UBK9 157 aaPredicted RBP18.02■□□□□ 0.48
HDGFL3-203ENST00000563404 SDK1Q7Z5N4 2213 aa18.02■□□□□ 0.47
HDGFL3-203ENST00000563404 CCDC163A0A0D9SF12 145 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 C2orf78A6NCI8 922 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 RPP40O75818 363 aaKnown RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 PDCP20941 246 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 LMO2P25791 158 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 HOXD13P35453 343 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 LHX1P48742 406 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 FAM160A1Q05DH4 1040 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 ALCAMQ13740 583 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 CC2D1AQ6P1N0 951 aaPredicted RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 CACNA2D4Q7Z3S7 1137 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 SPATA2LQ8IUW3 424 aaPredicted RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 SCN4BQ8IWT1 228 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 GPD1LQ8N335 351 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 ARL14EPQ8N8R7 260 aaPredicted RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 OSCP1Q8WVF1 389 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 HHIPQ96QV1 700 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 P2RY13Q9BPV8 354 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 CRTAC1Q9NQ79 661 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 INTS13Q9NVM9 706 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 DUS2Q9NX74 493 aaKnown RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 SLC8A2Q9UPR5 921 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 WNT6Q9Y6F9 365 aa18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
HDGFL3-203ENST00000563404 EML5Q05BV3 1969 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 ATG13O75143 517 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 EPN2O95208 641 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 TMEM191BP0C7N4 346 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 DRD1P21728 446 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms