RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 UBL4BQ8N7F7 174 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 SLC35F5Q8WV83 523 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ARMC5Q96C12 935 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 TOX2Q96NM4 488 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 RHOXF2Q9BQY4 288 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.07■□□□□ 0.64
COMMD4-208ENST00000563220 SYNCQ9H7C4 482 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 ST7Q9NRC1 585 aa19.07■□□□□ 0.64
COMMD4-208ENST00000563220 SIGLEC16A6NMB1 481 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 DCDC2CA8MYV0 355 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 I3L4J1 428 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 DDHD2O94830 711 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 ADORA2BP29275 332 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 BRCC3P46736 316 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 RGS7P49802 495 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 PDE4CQ08493 712 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 ZNF252P-AS1Q0IIN9 211 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 NOMO2Q5JPE7 1267 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 AADACL2Q6P093 401 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 DCUN1D2Q6PH85 259 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 B3GALNT2Q8NCR0 500 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 SEPT8Q92599 483 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 TNIP3Q96KP6 325 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 PARD6BQ9BYG5 372 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 PPP1R12CQ9BZL4 782 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 TMEM161AQ9NX61 479 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 DDX43Q9NXZ2 648 aaKnown RBP19.06■□□□□ 0.64
COMMD4-208ENST00000563220 WDR35Q9P2L0 1181 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 HESX1Q9UBX0 185 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 TMEM59LQ9UK28 342 aa19.06■□□□□ 0.64
COMMD4-208ENST00000563220 CCDC66A2RUB6 948 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 E5RJQ4 531 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 F8W810 466 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 PIK3R2O00459 728 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 GABBR2O75899 941 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 KRT3P12035 628 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 PTPN1P18031 435 aaKnown RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 TKTP29401 623 aaKnown RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 RFC1P35251 1148 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 TMEM86AQ8N2M4 240 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 ANKRD52Q8NB46 1076 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 MSANTD4Q8NCY6 345 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 JOSD2Q8TAC2 188 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 SLC2A14Q8TDB8 520 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 MCRS1Q96EZ8 462 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 UROC1Q96N76 676 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 IP6K2Q9UHH9 426 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 TTC7AQ9ULT0 858 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 PGRMC1O00264 195 aaKnown RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 ITGB1P05556 798 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 PYGMP11217 842 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 CYP2C18P33260 490 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 TAP1Q03518 808 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 DSC1Q08554 894 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 C1orf53Q5VUE5 145 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 DCLRE1AQ6PJP8 1040 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 RNPC3Q96LT9 517 aaKnown RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 SLC4A5Q9BY07 1137 aa19.05■□□□□ 0.64
COMMD4-208ENST00000563220 ELAC1Q9H777 363 aaKnown RBP19.05■□□□□ 0.64
COMMD4-208ENST00000563220 F8VP50 259 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 CXCL10P02778 98 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 SETSIPP0DME0 302 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 GJA8P48165 433 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 LHX1P48742 406 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 LBX1P52954 281 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 TAS2R40P59535 323 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 PAQR9Q6ZVX9 377 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-208ENST00000563220 APBB2Q92870 758 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 PNKPQ96T60 521 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 CRTAC1Q9NQ79 661 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 TBC1D13Q9NVG8 400 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 USTQ9Y2C2 406 aa19.04■□□□□ 0.64
COMMD4-208ENST00000563220 FGGP02679 453 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 MAN1A1P33908 653 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 CDR1P51861 262 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 RWDD2BP57060 319 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 MRPS25P82663 173 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 FBXO38Q6PIJ6 1188 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 TMEM110Q86TL2 294 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 COLGALT2Q8IYK4 626 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 FUKQ8N0W3 1084 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 IPO4Q8TEX9 1081 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 STK32AQ8WU08 396 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 HNRNPABQ99729 332 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 AP1M1Q9BXS5 423 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 METTL5Q9NRN9 209 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 OGFRQ9NZT2 677 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 M0QZQ0 153 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 CLDN5O00501 218 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 H2AFXP16104 143 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 BCAT1P54687 386 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 BST2Q10589 180 aaKnown RBP19.03■□□□□ 0.64
COMMD4-208ENST00000563220 OR6B2Q6IFH4 312 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 FAM183BPQ6ZVS7 135 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 EMC1Q8N766 993 aa19.03■□□□□ 0.64
COMMD4-208ENST00000563220 URGCPQ8TCY9 931 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms