RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 THAP12O43422 761 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 A1BGP04217 495 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 ACVR2AP27037 513 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 IL1R2P27930 398 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 PPM1AP35813 382 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 HSPA7P48741 367 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 PXNP49023 591 aaPredicted RBP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 BTKQ06187 659 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 NPY5RQ15761 445 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 MPEG1Q2M385 716 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 PREPLQ4J6C6 727 aaPredicted RBP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 RBM20Q5T481 1227 aaKnown RBP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 VPS53Q5VIR6 699 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 FNDC7Q5VTL7 733 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 RRAGBQ5VZM2 374 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 RNF44Q7L0R7 432 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 KCTD20Q7Z5Y7 419 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 GPR149Q86SP6 731 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 VGLL2Q8N8G2 317 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 VPS11Q9H270 941 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 SLC2A4RGQ9NR83 387 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 TRMT13Q9NUP7 481 aaKnown RBP6.77□□□□□ -1.33
LINC00557-201ENST00000563184 ZNF212Q9UDV6 495 aa6.77□□□□□ -1.33
LINC00557-201ENST00000563184 A0A0B4J269 797 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 LOC102723971A0A1B0GUV8 181 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 F5H697 171 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 FOSP01100 380 aaPredicted RBP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 LRPAP1P30533 357 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 HNRNPMP52272 730 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 DGKEP52429 567 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 MYO1EQ12965 1108 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TUBB3Q13509 450 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TUBA3CQ13748 450 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 MGAT5BQ3V5L5 792 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TIGD2Q4W5G0 525 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TUBA3EQ6PEY2 450 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 C1orf228Q6PIY5 440 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 LAYNQ6UX15 382 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 CATSPERGQ6ZRH7 1159 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 ARHGEF19Q8IW93 802 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 COLGALT2Q8IYK4 626 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 BPIFB1Q8TDL5 484 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 ASB10Q8WXI3 467 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 OSBPL9Q96SU4 736 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 PTDSS2Q9BVG9 487 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 WDR12Q9GZL7 423 aaKnown RBP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 CXorf36Q9H7Y0 433 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 NRDE2Q9H7Z3 1164 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TBC1D23Q9NUY8 699 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 INTS13Q9NVM9 706 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 DNMT3BQ9UBC3 853 aaKnown RBP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 NDRG4Q9ULP0 352 aaKnown RBP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 CAPN11Q9UMQ6 739 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 SSX2IPQ9Y2D8 614 aa6.76□□□□□ -1.33
LINC00557-201ENST00000563184 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00557-201ENST00000563184 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 RAB27BO00194 218 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 AREL1O15033 823 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 CCP110O43303 1012 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 KCNA3P22001 575 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 PPIFP30405 207 aaKnown RBP6.75□□□□□ -1.33
LINC00557-201ENST00000563184 GUCY1B3Q02153 619 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 KRT17Q04695 432 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 ARHGEF7Q14155 803 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 SLC29A2Q14542 456 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 ARHGAP40Q5TG30 622 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 MRGPREQ86SM8 312 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 YAF2Q8IY57 180 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 IPCEF1Q8WWN9 437 aaPredicted RBP6.75□□□□□ -1.33
LINC00557-201ENST00000563184 HAS1Q92839 578 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 MLST8Q9BVC4 326 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 AMBRA1Q9C0C7 1298 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 ARFGAP3Q9NP61 516 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 ANKFY1Q9P2R3 1169 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 DKK4Q9UBT3 224 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 MAN2B2Q9Y2E5 1009 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 MYRFQ9Y2G1 1151 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 CDY1Q9Y6F8 540 aa6.75□□□□□ -1.33
LINC00557-201ENST00000563184 RRP9O43818 475 aaKnown RBP6.74□□□□□ -1.33
LINC00557-201ENST00000563184 CSF1RP07333 972 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 PPP3CBP16298 524 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 EEF1GP26641 437 aaKnown RBP6.74□□□□□ -1.33
LINC00557-201ENST00000563184 CD6P30203 668 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 PTDSS1P48651 473 aaKnown RBP6.74□□□□□ -1.33
LINC00557-201ENST00000563184 CPT1AP50416 773 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 STK3Q13188 491 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 ZXDCQ2QGD7 858 aaPredicted RBP6.74□□□□□ -1.33
LINC00557-201ENST00000563184 FAM83BQ5T0W9 1011 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 PLAG1Q6DJT9 500 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 RGS7BPQ6MZT1 257 aaPredicted RBP6.74□□□□□ -1.33
LINC00557-201ENST00000563184 BEND5Q7L4P6 421 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 TXLNBQ8N3L3 684 aa6.74□□□□□ -1.33
LINC00557-201ENST00000563184 FANCBQ8NB91 859 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms