RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 AGAP2Q99490 1192 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 MESP1Q9BRJ9 268 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 ACTRT3Q9BYD9 372 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 C22orf23Q9BZE7 217 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 XPNPEP3Q9NQH7 507 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 TRMT13Q9NUP7 481 aaKnown RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 VSX1Q9NZR4 365 aaPredicted RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 C11orf21Q9P2W6 132 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 STAP2Q9UGK3 403 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 AFF4Q9UHB7 1163 aaKnown RBP3.64□□□□□ -1.83
CHD9-207ENST00000562806 OGDHLQ9ULD0 1010 aa3.64□□□□□ -1.83
CHD9-207ENST00000562806 WDR27A2RRH5 827 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 SLC16A3O15427 465 aaKnown RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 CCP110O43303 1012 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 PROP1O75360 226 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 URI1O94763 535 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 NUDT3O95989 172 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 MYF5P13349 255 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 BRAFP15056 766 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 RHCEP18577 417 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 WT1P19544 449 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 KLRC1P26715 233 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 TOB1P50616 345 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 UCP3P55916 312 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 SIM1P81133 766 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 RHDQ02161 417 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 KRT17Q04695 432 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 CTBP1Q13363 440 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 TMEM63BQ5T3F8 832 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 CCDC181Q5TID7 509 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 ANKRD16Q6P6B7 361 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 ZNF551Q7Z340 670 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 ZNF804AQ7Z570 1209 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 WDR53Q7Z5U6 358 aaPredicted RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 C14orf80Q86SX3 495 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 SLC15A4Q8N697 577 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 MSLNLQ96KJ4 702 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 STRBPQ96SI9 672 aaKnown RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 P2RX7Q99572 595 aaKnown RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 TIMP4Q99727 224 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 TTYH3Q9C0H2 523 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 DHX36Q9H2U1 1008 aaKnown RBP3.63□□□□□ -1.83
CHD9-207ENST00000562806 SMOC2Q9H3U7 446 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 ATP6V0A4Q9HBG4 840 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 ZNF287Q9HBT7 754 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 SERHLQ9NQF3 203 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 FOXJ2Q9P0K8 574 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 ENTPD2Q9Y5L3 495 aa3.63□□□□□ -1.83
CHD9-207ENST00000562806 TRIM43BA6NCK2 446 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 TBX3O15119 743 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SUV39H1O43463 412 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 PARNO95453 639 aaKnown RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 DLDP09622 509 aaKnown RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 PHKG2P15735 406 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 ZFXP17010 805 aaPredicted RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 CHRM3P20309 590 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 BMP5P22003 454 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 PEX2P28328 305 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 PDE6CP51160 858 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 DGKEP52429 567 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SUMO3P55854 103 aaPredicted RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 LILRA4P59901 499 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 COL10A1Q03692 680 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SEMA5AQ13591 1074 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 GRM3Q14832 879 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 LLGL1Q15334 1064 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 TBCCQ15814 346 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 TXNRD1Q16881 649 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 TBC1D25Q3MII6 688 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 APOA5Q6Q788 366 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 PRIMA1Q86XR5 153 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 RAB11FIP4Q86YS3 637 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 DNAJC10Q8IXB1 793 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SLC15A3Q8IY34 581 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 YAF2Q8IY57 180 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 KRT78Q8N1N4 520 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 MPP5Q8N3R9 675 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 FAM156AQ8NDB6 213 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SIMC1Q8NDZ2 872 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 SPSB4Q96A44 273 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 TRIM43Q96BQ3 446 aaPredicted RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 ZNF668Q96K58 619 aaPredicted RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 ZC3H10Q96K80 434 aaKnown RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 UROC1Q96N76 676 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 UNKQ9C0B0 810 aaKnown RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 MS4A7Q9GZW8 240 aaPredicted RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 FAM83DQ9H4H8 585 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 DDX21Q9NR30 783 aaKnown RBP eCLIP3.62□□□□□ -1.83
CHD9-207ENST00000562806 SERTAD4Q9NUC0 356 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 NDRG4Q9ULP0 352 aaKnown RBP3.62□□□□□ -1.83
CHD9-207ENST00000562806 ADGRA2Q96PE1 1338 aa3.62□□□□□ -1.83
CHD9-207ENST00000562806 LOC102723971A0A1B0GUV8 181 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 ADM5C9JUS6 153 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 KIAA0355O15063 1070 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 DCLK1O15075 740 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 CAND2O75155 1236 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 MAP4K4O95819 1239 aaPredicted RBP3.61□□□□□ -1.83
CHD9-207ENST00000562806 PRKCBP05771 671 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 CHRM2P08172 466 aa3.61□□□□□ -1.83
CHD9-207ENST00000562806 ZKSCAN1P17029 563 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms