RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DLK2Q6UY11 383 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 PRR18Q8N4B5 295 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 C3orf20Q8ND61 904 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 SLC17A8Q8NDX2 589 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 IL17RDQ8NFM7 739 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 KLHL32Q96NJ5 620 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 MAP3K14Q99558 947 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 ACTRT3Q9BYD9 372 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 FNDC1Q4ZHG4 1894 aaPredicted RBP4.01□□□□□ -1.77
HDGFL3-202ENST00000562702 OFD1O75665 1012 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 ANXA1P04083 346 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 FTH1P19P0C7X4 201 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 SFPQP23246 707 aaKnown RBP eCLIP4□□□□□ -1.77
HDGFL3-202ENST00000562702 CYP2C19P33261 490 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 FXR1P51114 621 aaKnown RBP eCLIP4□□□□□ -1.77
HDGFL3-202ENST00000562702 RAB27AP51159 221 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 ZNF280AP59817 542 aaPredicted RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 DSC2Q02487 901 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 NOGQ13253 232 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 DAZAP2Q15038 168 aaPredicted RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 KRTAP27-1Q3LI81 207 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 KHDC1Q4VXA5 237 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 IFIT1BQ5T764 474 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 ZNF618Q5T7W0 954 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 SLC4A10Q6U841 1118 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 ZNF365Q70YC5 407 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 MEPCEQ7L2J0 689 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 WDR53Q7Z5U6 358 aaPredicted RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 CATIPQ7Z7H3 387 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 PNLDC1Q8NA58 520 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 JPH3Q8WXH2 748 aaPredicted RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 REPS1Q96D71 796 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 MVB12AQ96EY5 273 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 ASB2Q96Q27 587 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 VRK1Q99986 396 aaPredicted RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 GTPBP4Q9BZE4 634 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 CDH19Q9H159 772 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 SIDT1Q9NXL6 827 aaKnown RBP4□□□□□ -1.77
HDGFL3-202ENST00000562702 ZIM2Q9NZV7 527 aa4□□□□□ -1.77
HDGFL3-202ENST00000562702 SLC43A1O75387 559 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 GNAI3P08754 354 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 U2AF1L5P0DN76 240 aaPredicted RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 SLC6A4P31645 630 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 EEFSECP57772 596 aaKnown RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 GNAI1P63096 354 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 U2AF1Q01081 240 aaKnown RBP eCLIP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 CCDC157Q569K6 752 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 TMPRSS9Q7Z410 1059 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 FAM167AQ96KS9 214 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 LYZL4Q96KX0 146 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 C5orf34Q96MH7 638 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 AIFM3Q96NN9 605 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 DMRTA2Q96SC8 542 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 RTFDC1Q9BY42 306 aaPredicted RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 WDCPQ9H6R7 721 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 NMRK2Q9NPI5 230 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 RLIMQ9NVW2 624 aa3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 VSX1Q9NZR4 365 aaPredicted RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 FEZ2Q9UHY8 353 aaPredicted RBP3.99□□□□□ -1.77
HDGFL3-202ENST00000562702 WDR17Q8IZU2 1322 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 LRRC14BA6NHZ5 514 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 NT5C1B-RDH14C9J2C7 533 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 F2RL2O00254 374 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 POLRMTO00411 1230 aaKnown RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 RFPL1O75677 317 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 SBK3P0C264 359 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 HSPA6P17066 643 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 ITGALP20701 1170 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 HK3P52790 923 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 HOXA4Q00056 320 aaPredicted RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 SNAPC2Q13487 334 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 CERKLQ49MI3 558 aaPredicted RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 FLYWCH1Q4VC44 716 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 CCDC93Q567U6 631 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 ATAT1Q5SQI0 421 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 SHC4Q6S5L8 630 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 HEATR3Q7Z4Q2 680 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 GRAMD1CQ8IYS0 662 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 ZBTB8BQ8NAP8 495 aaPredicted RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 ACRBPQ8NEB7 543 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 POC1BQ8TC44 478 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 JDP2Q8WYK2 163 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 CUL5Q93034 780 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 HPS3Q969F9 1004 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 FAM136AQ96C01 138 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 MTFMTQ96DP5 389 aaKnown RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 PUS7Q96PZ0 661 aaKnown RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 NELL2Q99435 816 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 FAM118BQ9BPY3 351 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 AMBRA1Q9C0C7 1298 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 LMBRD1Q9NUN5 540 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 CFAP97Q9P2B7 532 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 DKK3Q9UBP4 350 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 ABCF2Q9UG63 623 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 TCEAL9Q9UHQ7 104 aa3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 THRAP3Q9Y2W1 955 aaKnown RBP3.98□□□□□ -1.77
HDGFL3-202ENST00000562702 PCDHA3Q9Y5H8 950 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms