RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TSPY1Q01534 308 aa27.13■■□□□ 1.93
NME3-202ENST00000561637 KMT5BQ4FZB7 885 aa27.13■■□□□ 1.93
NME3-202ENST00000561637 ARID3BQ8IVW6 561 aaPredicted RBP27.13■■□□□ 1.93
NME3-202ENST00000561637 ZNF516Q92618 1163 aa27.13■■□□□ 1.93
NME3-202ENST00000561637 GTF3C4Q9UKN8 822 aa27.13■■□□□ 1.93
NME3-202ENST00000561637 NME7Q9Y5B8 376 aa27.13■■□□□ 1.93
NME3-202ENST00000561637 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.12■■□□□ 1.93
NME3-202ENST00000561637 SLC30A4O14863 429 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 CST3P01034 146 aaPredicted RBP27.12■■□□□ 1.93
NME3-202ENST00000561637 HMGA1P17096 107 aaKnown RBP27.12■■□□□ 1.93
NME3-202ENST00000561637 PSMC3P17980 439 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 CYP2F1P24903 491 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 PSMC1P62191 440 aaKnown RBP27.12■■□□□ 1.93
NME3-202ENST00000561637 PSMD6Q15008 389 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 DDR2Q16832 855 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 DUOXA2Q1HG44 320 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 LAIR1Q6GTX8 287 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 MAMSTRQ6ZN01 415 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 PRR23BQ6ZRT6 265 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 TRAPPC11Q7Z392 1133 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 LIMS2Q7Z4I7 341 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 TMEM150AQ86TG1 271 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 ITIH5Q86UX2 942 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 WDR49Q8IV35 697 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 TOP6BLQ8N6T0 577 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 XXYLT1Q8NBI6 393 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 ELMO3Q96BJ8 720 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 CGRRF1Q99675 332 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 GDPD2Q9HCC8 539 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 RAB23Q9ULC3 237 aa27.12■■□□□ 1.93
NME3-202ENST00000561637 MYBPHLA2RUH7 354 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 ARNTLO00327 626 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 GABRDO14764 452 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 PRPF40AO75400 957 aaKnown RBP27.11■■□□□ 1.93
NME3-202ENST00000561637 LMO2P25791 158 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 NDUFA8P51970 172 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 KRT85P78386 507 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 VEPH1Q14D04 833 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 KNOP1Q1ED39 458 aaKnown RBP27.11■■□□□ 1.93
NME3-202ENST00000561637 HS2ST1Q7LGA3 356 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 MFSD6LQ8IWD5 586 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 TMEM86AQ8N2M4 240 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 CELF5Q8N6W0 485 aaKnown RBP27.11■■□□□ 1.93
NME3-202ENST00000561637 NETO1Q8TDF5 533 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 C2orf15Q8WU43 125 aaKnown RBP27.11■■□□□ 1.93
NME3-202ENST00000561637 ACBD6Q9BR61 282 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 GOLPH3LQ9H4A5 285 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 LMAN1LQ9HAT1 526 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 KIAA1586Q9HCI6 787 aa27.11■■□□□ 1.93
NME3-202ENST00000561637 TNNI1P19237 187 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 NRLP54845 237 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 MYL7Q01449 175 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 SURF1Q15526 300 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 ZFYVE19Q96K21 471 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 MRPL45Q9BRJ2 306 aaKnown RBP27.1■■□□□ 1.93
NME3-202ENST00000561637 EXOC1Q9NV70 894 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 CHD6Q8TD26 2715 aa27.1■■□□□ 1.93
NME3-202ENST00000561637 MAN2B1O00754 1011 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 RETP07949 1114 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 SOX9P48436 509 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 SATB1Q01826 763 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 DMWDQ09019 674 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 GAS6Q14393 721 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 C12orf56Q8IXR9 622 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 TTC8Q8TAM2 541 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 DEPDC1BQ8WUY9 529 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 FAM3CQ92520 227 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 SLC46A2Q9BY10 475 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 GPR88Q9GZN0 384 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 CRTAC1Q9NQ79 661 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 SEMA4GQ9NTN9 838 aa27.09■■□□□ 1.93
NME3-202ENST00000561637 MAGED2Q9UNF1 606 aaPredicted RBP27.09■■□□□ 1.93
NME3-202ENST00000561637 NUP210Q8TEM1 1887 aaPredicted RBP27.08■■□□□ 1.93
NME3-202ENST00000561637 ZNF263O14978 683 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 GDF9O60383 454 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 PDGFRBP09619 1106 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 SMARCB1Q12824 385 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 MYO1EQ12965 1108 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 SRSF5Q13243 272 aaKnown RBP27.08■■□□□ 1.93
NME3-202ENST00000561637 NFE2Q16621 373 aaPredicted RBP27.08■■□□□ 1.93
NME3-202ENST00000561637 FNBP1Q96RU3 617 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 SYT15Q9BQS2 421 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 PIAS3Q9Y6X2 628 aa27.08■■□□□ 1.93
NME3-202ENST00000561637 HRO43593 1189 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 EXOC3O60645 756 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 TADA3O75528 432 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 F11P03951 625 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 CCR3P51677 355 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 NLRP12P59046 1061 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 TAF12Q16514 161 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 PRR23CQ6ZRP0 262 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 FSIP1Q8NA03 581 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 IRF7Q92985 503 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 MYLPFQ96A32 169 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 KCTD10Q9H3F6 313 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 TASP1Q9H6P5 420 aa27.07■■□□□ 1.92
NME3-202ENST00000561637 CNOT1A5YKK6 2376 aaKnown RBP27.07■■□□□ 1.92
NME3-202ENST00000561637 OBSL1O75147 1896 aa27.06■■□□□ 1.92
NME3-202ENST00000561637 CACNA1GO43497 2377 aa27.06■■□□□ 1.92
NME3-202ENST00000561637 FAM237AA0A1B0GTK4 181 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms