RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 SPAG7O75391 227 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 MICAL2O94851 1124 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 ARHGEF6Q15052 776 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 FSCN1Q16658 493 aaKnown RBP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 DUSP28Q4G0W2 176 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 MDM1Q8TC05 714 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 ZNF516Q92618 1163 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 TTC25Q96NG3 672 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 SUN1O94901 812 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 TROVE2P10155 538 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 YY1P25490 414 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 HOXD10P28358 340 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 RFC1P35251 1148 aaPredicted RBP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 MAGEA4P43358 317 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 IRX4P78413 519 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 CACNB2Q08289 660 aaPredicted RBP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 FAXCQ5TGI0 409 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 ANKRD20A3Q5VUR7 823 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 PGK1P00558 417 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 PSMC4P43686 418 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 MAP2K5Q13163 448 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 NLRP14Q86W24 1093 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 SCUBE3Q8IX30 993 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP4E1-205ENST00000561393 KIAA1257Q9ULG3 409 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 USP18Q9UMW8 372 aa17.15■□□□□ 0.34
AP4E1-205ENST00000561393 CHRNB2P17787 502 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 FAM110CQ1W6H9 321 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 EPS8L3Q8TE67 593 aaKnown RBP17.14■□□□□ 0.33
AP4E1-205ENST00000561393 FAM172AQ8WUF8 416 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 NOCTQ9UK39 431 aaKnown RBP17.14■□□□□ 0.33
AP4E1-205ENST00000561393 COQ4Q9Y3A0 265 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 CYB561D2O14569 222 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 ATP4AP20648 1035 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 PNPLA4P41247 253 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 ATP11CQ8NB49 1132 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 ERVK-5Q9HDB9 667 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 SLC38A7Q9NVC3 462 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 ATP8B3O60423 1300 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 LSP1P33241 339 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 HSPA9P38646 679 aaKnown RBP17.14■□□□□ 0.33
AP4E1-205ENST00000561393 B3GNT9Q6UX72 402 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 PRG3Q9Y2Y8 225 aaPredicted RBP17.14■□□□□ 0.33
AP4E1-205ENST00000561393 NR2E1Q9Y466 385 aa17.14■□□□□ 0.33
AP4E1-205ENST00000561393 MYH11P35749 1972 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 E5RJQ4 531 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 EIF3HO15372 352 aaKnown RBP eCLIP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 AKR1A1P14550 325 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CCNG2Q16589 344 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CPNE8Q86YQ8 564 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 ADGRF2Q8IZF7 708 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CNPY3Q9BT09 278 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CDC42EP4Q9H3Q1 356 aaKnown RBP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 NRCAMQ92823 1304 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 GOLGA8RI6L899 631 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CAND2O75155 1236 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 ACO1P21399 889 aaKnown RBP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CCDC6Q16204 474 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 C3orf20Q8ND61 904 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 SAE1Q9UBE0 346 aaPredicted RBP17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CHMP2BQ9UQN3 213 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CASTOR2A6NHX0 329 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CDH16O75309 829 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 CHN1P15882 459 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 MCL1Q07820 350 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 PID1Q7Z2X4 250 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 FAM131BQ86XD5 332 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 GLT1D1Q96MS3 346 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 RILPQ96NA2 401 aa17.13■□□□□ 0.33
AP4E1-205ENST00000561393 RARGP13631 454 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 DEUP1Q05D60 604 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 SLC7A14Q8TBB6 771 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 MAML3Q96JK9 1138 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 AGAP3Q96P47 875 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 C10orf88Q9H8K7 445 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 XPO7Q9UIA9 1087 aaKnown RBP17.12■□□□□ 0.33
AP4E1-205ENST00000561393 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
AP4E1-205ENST00000561393 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 MSCO60682 206 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 PAEPP09466 180 aa17.12■□□□□ 0.33
AP4E1-205ENST00000561393 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms