RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRIM65Q6PJ69 517 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 GRASPQ7Z6J2 395 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 YAF2Q8IY57 180 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 OR10T2Q8NGX3 314 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 SEMA4DQ92854 862 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 MIS12Q9H081 205 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 ATXN3LQ9H3M9 355 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 LRRC4Q9HBW1 653 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 DMAP1Q9NPF5 467 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 FAM49BQ9NUQ9 324 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 ZNHIT6Q9NWK9 470 aaKnown RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 TRPM5Q9NZQ8 1165 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 PRKAG3Q9UGI9 489 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
TPM1-229ENST00000561242 YIPF1Q9Y548 306 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.37□□□□□ -0.594e-8■□□□□ 10.9
TPM1-229ENST00000561242 BRCA2P51587 3418 aa11.37□□□□□ -0.59
TPM1-229ENST00000561242 LGALS16A8MUM7 142 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 THAP12O43422 761 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 MBTPS2O43462 519 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 ATP2C2O75185 946 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 RFPL2O75678 378 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 EFEMP2O95967 443 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 SLC9A1P19634 815 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 IGFBP6P24592 240 aaPredicted RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 CYP2F1P24903 491 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 PON1P27169 355 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 MAGEA11P43364 429 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 ASPAP45381 313 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 GOLGA8FQ08AF8 430 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 GOLGA8DPQ0D2H9 430 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 DDR2Q16832 855 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 CDKAL1Q5VV42 579 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 DENND5BQ6ZUT9 1274 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 GET4Q7L5D6 327 aaPredicted RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 VPS36Q86VN1 386 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 DRC7Q8IY82 874 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 NUP93Q8N1F7 819 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 CRYBG2Q8N1P7 616 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 ARHGAP18Q8N392 663 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 TMEM130Q8N3G9 435 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 RBBP8NLQ8NC74 664 aaPredicted RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 SMRP1Q8NCR6 262 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 PDZD8Q8NEN9 1154 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 SLC2A14Q8TDB8 520 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 PCED1BQ96HM7 432 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 FAM207AQ9NSI2 230 aaPredicted RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 SEPT11Q9NVA2 429 aaKnown RBP11.36□□□□□ -0.59
TPM1-229ENST00000561242 CEP290O15078 2479 aa11.36□□□□□ -0.59
TPM1-229ENST00000561242 GRXCR2A6NFK2 248 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 TBX10O75333 385 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 CILPO75339 1184 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 RHOP08100 348 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 RALAP11233 206 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 DDX6P26196 483 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-229ENST00000561242 YWHAQP27348 245 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 GNA15P30679 374 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 AVPR1AP37288 418 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 CDR1P51861 262 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 MAP3K7CLP57077 242 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 FANCCQ00597 558 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 TFF2Q03403 129 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 FAM171BQ6P995 826 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 MTSS1LQ765P7 747 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 DHX40Q8IX18 779 aaKnown RBP11.35□□□□□ -0.59
TPM1-229ENST00000561242 SIX6OS1Q8N1H7 587 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 TTC16Q8NEE8 873 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 CXorf38Q8TB03 319 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 KBTBD7Q8WVZ9 684 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 E2F7Q96AV8 911 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 C8orf48Q96LL4 319 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 STK33Q9BYT3 514 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 TRIM5Q9C035 493 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
TPM1-229ENST00000561242 APOBEC3GQ9HC16 384 aaKnown RBP11.35□□□□□ -0.59
TPM1-229ENST00000561242 WDR6Q9NNW5 1121 aaKnown RBP11.35□□□□□ -0.59
TPM1-229ENST00000561242 ST7Q9NRC1 585 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 KRT82Q9NSB4 513 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 THG1LQ9NWX6 298 aaKnown RBP11.35□□□□□ -0.59
TPM1-229ENST00000561242 COMMD8Q9NX08 183 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 CLEC1BQ9P126 229 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 CLUHO75153 1309 aa11.35□□□□□ -0.59
TPM1-229ENST00000561242 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 SLC38A8A6NNN8 435 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 LRRN2O75325 713 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 SEC24AO95486 1093 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 POU2F2P09086 479 aa11.34□□□□□ -0.59
TPM1-229ENST00000561242 KCNA4P22459 653 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms