RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 URGCPQ8TCY9 931 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 SLC35F5Q8WV83 523 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 LINC01599Q8WXQ3 324 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 SEPT8Q92599 483 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 MCEEQ96PE7 176 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
HDDC3-206ENST00000561036 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 DSEQ9UL01 958 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 CCDC151A5D8V7 595 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 KRIT1O00522 736 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 PDGFRBP09619 1106 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 ODC1P11926 461 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 RPL7AP62424 266 aaKnown RBP18.07■□□□□ 0.48
HDDC3-206ENST00000561036 BST2Q10589 180 aaKnown RBP18.07■□□□□ 0.48
HDDC3-206ENST00000561036 ACAP1Q15027 740 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 WSCD1Q658N2 575 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 FBXO38Q6PIJ6 1188 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 SLC39A5Q6ZMH5 540 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 TMEM110Q86TL2 294 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 ZDHHC17Q8IUH5 632 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 RSPH1Q8WYR4 309 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 HNRNPABQ99729 332 aaKnown RBP18.07■□□□□ 0.48
HDDC3-206ENST00000561036 DPEP3Q9H4B8 488 aa18.07■□□□□ 0.48
HDDC3-206ENST00000561036 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 NBNO60934 754 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 FGGP02679 453 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 CYP11A1P05108 521 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 CAPN2P17655 700 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 PTPN1P18031 435 aaKnown RBP18.06■□□□□ 0.48
HDDC3-206ENST00000561036 SCNN1AP37088 669 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 ACADSBP45954 432 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 MARCKSL1P49006 195 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 RPL34P49207 117 aaKnown RBP18.06■□□□□ 0.48
HDDC3-206ENST00000561036 RNASE9P60153 205 aaKnown RBP18.06■□□□□ 0.48
HDDC3-206ENST00000561036 LONRF2Q1L5Z9 754 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 NOMO2Q5JPE7 1267 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 FBXO46Q6PJ61 603 aaPredicted RBP18.06■□□□□ 0.48
HDDC3-206ENST00000561036 METTL23Q86XA0 190 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 KATNAL2Q8IYT4 538 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 HNRNPLLQ8WVV9 542 aaKnown RBP18.06■□□□□ 0.48
HDDC3-206ENST00000561036 ZNF333Q96JL9 665 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 HSFY1Q96LI6 401 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 EPC1Q9H2F5 836 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 INPP5FQ9Y2H2 1132 aa18.06■□□□□ 0.48
HDDC3-206ENST00000561036 GOLGA8SH3BPF8 625 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 M0QZQ0 153 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 ENPP3O14638 875 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PQBP1O60828 265 aaKnown RBP18.05■□□□□ 0.48
HDDC3-206ENST00000561036 ERLIN1O75477 346 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 MYCP01106 439 aaPredicted RBP18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PYGMP11217 842 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PCSK1P29120 753 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 MNX1P50219 401 aaPredicted RBP18.05■□□□□ 0.48
HDDC3-206ENST00000561036 SLC8A3P57103 927 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PDE4CQ08493 712 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 DSC1Q08554 894 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 GPNMBQ14956 572 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PKN2Q16513 984 aaKnown RBP18.05■□□□□ 0.48
HDDC3-206ENST00000561036 TIGD5Q53EQ6 642 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 CPNE8Q86YQ8 564 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 ANKLE1Q8NAG6 615 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 C3orf58Q8NDZ4 430 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 MAIP1Q8WWC4 291 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 ARMC5Q96C12 935 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 PNKPQ96T60 521 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 SLITRK6Q9H5Y7 841 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 ST7Q9NRC1 585 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 DDX43Q9NXZ2 648 aaKnown RBP18.05■□□□□ 0.48
HDDC3-206ENST00000561036 CDH9Q9ULB4 789 aa18.05■□□□□ 0.48
HDDC3-206ENST00000561036 TDRD15B5MCY1 1934 aaKnown RBP18.04■□□□□ 0.48
HDDC3-206ENST00000561036 TMEM189-UBE2V1I3L0A0 370 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 HOXA2O43364 376 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 B3GAT3O94766 335 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 GJB6O95452 261 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 CXCL10P02778 98 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 CCDC130P13994 396 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 TYMPP19971 482 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 RFC1P35251 1148 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-206ENST00000561036 PLCB3Q01970 1234 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 ZNF252P-AS1Q0IIN9 211 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 ZNF211Q13398 564 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-206ENST00000561036 CLLU1OSQ5K130 101 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 PMF1Q6P1K2 205 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 CC2D1AQ6P1N0 951 aaPredicted RBP18.04■□□□□ 0.48
HDDC3-206ENST00000561036 DBF4BQ8NFT6 615 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 EXD1Q8NHP7 514 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 SLC2A14Q8TDB8 520 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 SUSD3Q96L08 255 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 KRT12Q99456 494 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 LRRC1Q9BTT6 524 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 METTL5Q9NRN9 209 aaKnown RBP18.04■□□□□ 0.48
HDDC3-206ENST00000561036 TJP2Q9UDY2 1190 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 MTUS1Q9ULD2 1270 aa18.04■□□□□ 0.48
HDDC3-206ENST00000561036 PCDHB7Q9Y5E2 793 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms