RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 CLDN5O00501 218 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 ZNF197O14709 1029 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 STX10O60499 249 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 BDNFP23560 247 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 NLRP12P59046 1061 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 HTR4Q13639 388 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 CFAP221Q4G0U5 840 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 B3GALNT2Q8NCR0 500 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 FGF14Q92915 247 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 IL21Q9HBE4 155 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 METTL14Q9HCE5 456 aaKnown RBP12.89□□□□□ -0.35
USP8-212ENST00000560730 TMEM30AQ9NV96 361 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
USP8-212ENST00000560730 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 COQ4Q9Y3A0 265 aa12.89□□□□□ -0.35
USP8-212ENST00000560730 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 P4HA1P13674 534 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 MAGEA11P43364 429 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 FMO5P49326 533 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 NDST1P52848 882 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 TEAD2Q15562 447 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 STXBP5Q5T5C0 1151 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 C4orf50Q6ZRC1 276 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 ITIH5Q86UX2 942 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 IRF2BP1Q8IU81 584 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 SCN4BQ8IWT1 228 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP8-212ENST00000560730 TWNKQ96RR1 684 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 ARID3AQ99856 593 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 IMPG2Q9BZV3 1241 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 NIF3L1Q9GZT8 377 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 NARSO43776 548 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 MICAL2O94851 1124 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 CD58P19256 250 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 GABRR2P28476 465 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 MARSP56192 900 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 TDGQ13569 410 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 MAPRE1Q15691 268 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 FAM78AQ5JUQ0 283 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 KXD1Q9BQD3 176 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 PLA2G2FQ9BZM2 168 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 CYP3A43Q9HB55 503 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
USP8-212ENST00000560730 MAGED2Q9UNF1 606 aaPredicted RBP12.88□□□□□ -0.35
USP8-212ENST00000560730 SLC38A8A6NNN8 435 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 GPR37L1O60883 481 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 FCARP24071 287 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 CYP4F8P98187 520 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 KCNH2Q12809 1159 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 LRMPQ12912 555 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 TAF12Q16514 161 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 CCDC150Q8NCX0 1101 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
USP8-212ENST00000560730 ZDBF2Q9HCK1 2354 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 TMEM221A6NGB7 291 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 F8VP50 259 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 M0R296 226 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 PMM2O15305 246 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CILPO75339 1184 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 NOL4O94818 638 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 FGFR1OPO95684 399 aaKnown RBP12.86□□□□□ -0.35
USP8-212ENST00000560730 GNA14O95837 355 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 F11P03951 625 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CSH1P0DML2 217 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CSH2P0DML3 217 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CCDC130P13994 396 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 GRIK1P39086 918 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 USP46P62068 366 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 SIGLEC14Q08ET2 396 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms