RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 TMEM176AQ96HP8 235 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 IL21RQ9HBE5 538 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 TOPORSQ9NS56 1045 aaPredicted RBP12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 SRPK3Q9UPE1 567 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 PCDHGB2Q9Y5G2 931 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 WNT6Q9Y6F9 365 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 ITPR3Q14573 2671 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 FBN2P35556 2912 aa12.37□□□□□ -0.43
KNSTRN-211ENST00000560673 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 OR6C75A6NL08 312 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 ZBTB43O43298 467 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 HSPA4P34932 840 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 MATKP42679 507 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 CCR10P46092 362 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 NEK4P51957 841 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 YARSP54577 528 aaKnown RBP12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 UCNP55089 124 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 TMPRSS3P57727 454 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 PTPRNQ16849 979 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 C4orf17Q53FE4 359 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 WDR45BQ5MNZ6 344 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 ARHGAP40Q5TG30 622 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 CDCA2Q69YH5 1023 aaPredicted RBP12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 IL27RAQ6UWB1 636 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 EFCAB13Q8IY85 973 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 FOXJ1Q92949 421 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 ZNF419Q96HQ0 510 aaPredicted RBP12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 NRSN2Q9GZP1 204 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 HSFX1Q9UBD0 423 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 VAV3Q9UKW4 847 aa12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
KNSTRN-211ENST00000560673 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 A0A1B0GTW7 788 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 ZNF217O75362 1048 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 ACTN2P35609 894 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 OPRD1P41143 372 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 TUFMP49411 452 aaKnown RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 MYO1EQ12965 1108 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 RTP5Q14D33 572 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 EPHA7Q15375 998 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 BROXQ5VW32 411 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 EEF1DP3Q658K8 133 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 TXNDC8Q6A555 127 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 APBB1IPQ7Z5R6 666 aaPredicted RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 USP37Q86T82 979 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 TTC9Q92623 222 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 CCDC43Q96MW1 224 aaKnown RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 LGMNQ99538 433 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 CALCOCO1Q9P1Z2 691 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
KNSTRN-211ENST00000560673 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 GOLGA8AA7E2F4 631 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 ACKR2O00590 384 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 ADAM23O75077 832 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 NDUFS2O75306 463 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 NFATC1O95644 943 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 KRT10P13645 584 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 LIG1P18858 919 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 MAOBP27338 520 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 FAM160A1Q05DH4 1040 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 SERINC3Q13530 473 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 MYBPC2Q14324 1141 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 HLA-BQ31612 363 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 XKR4Q5GH76 650 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 MRPS31Q92665 395 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 LSG1Q9H089 658 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 DDX25Q9UHL0 483 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
KNSTRN-211ENST00000560673 MYMKA6NI61 221 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 GOLGA6L22H0YM25 854 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 TERTO14746 1132 aaKnown RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 ZBTB24O43167 697 aaPredicted RBP12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 LARGE1O95461 756 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 GABRG2P18507 467 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 NLRP12P59046 1061 aa12.33□□□□□ -0.44
KNSTRN-211ENST00000560673 ZNF77Q15935 545 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms