RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 FAM160A1Q05DH4 1040 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 MCL1Q07820 350 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 ZNF174Q15697 407 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 MAP7D1Q3KQU3 841 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 RINT1Q6NUQ1 792 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CCNI2Q6ZMN8 369 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 C1orf186Q6ZWK4 172 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 TTC30AQ86WT1 665 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 HDDC3Q8N4P3 179 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 PNPLA1Q8N8W4 532 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 OR2I1PQ8NGU4 316 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CCDC26Q8TAB7 109 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 MDM1Q8TC05 714 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 SPPL2BQ8TCT7 592 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 C2orf15Q8WU43 125 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CAMK1GQ96NX5 476 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 RUSC1Q9BVN2 902 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 GTPBP2Q9BX10 602 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CCDC86Q9H6F5 360 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 CAPN10Q9HC96 672 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 DDX19AQ9NUU7 478 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 SLC6A14Q9UN76 642 aa9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-217ENST00000560521 KNL1Q8NG31 2342 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 CFIP05156 583 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 ADRB2P07550 413 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 CLTAP09496 248 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 OR52Z1P0C646 297 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 IFNAR2P48551 515 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 FOSBP53539 338 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 MRPS21P82921 87 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 USP4Q13107 963 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 NR1H3Q13133 447 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 TRIP6Q15654 476 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 DUOXA1Q1HG43 343 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 SPDYCQ5MJ68 293 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 SDHAF4Q5VUM1 108 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 C9orf57Q5W0N0 161 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 HAUS3Q68CZ6 603 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 SFTPA1Q8IWL2 248 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 TMEM161BQ8NDZ6 487 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 GLIS3Q8NEA6 775 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 LRRC15Q8TF66 581 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 ADAMTS14Q8WXS8 1223 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 MRPS31Q92665 395 aaKnown RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 LRIG1Q96JA1 1093 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 C17orf75Q9HAS0 396 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 TMLHEQ9NVH6 421 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 CACNA2D2Q9NY47 1150 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 CIZ1Q9ULV3 898 aaPredicted RBP9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 RAXQ9Y2V3 346 aa9.67□□□□□ -0.86
RABGGTA-217ENST00000560521 MUC22E2RYF6 1773 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ANO9A1A5B4 782 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 EIF4E1BA6NMX2 242 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SGK1O00141 431 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 XPOTO43592 962 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SH3BP5O60239 455 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 FAM189A1O60320 539 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 GJB3O75712 270 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ALDH1A2O94788 518 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 REC8O95072 547 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SERPINF2P08697 491 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 FTH1P19P0C7X4 201 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 CSH1P0DML2 217 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 CSH2P0DML3 217 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 MAPTP10636 758 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 DPP6P42658 865 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 MATR3P43243 847 aaKnown RBP eCLIP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ATXN3P54252 364 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ZXDBP98169 803 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 GFPT1Q06210 699 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SMARCB1Q12824 385 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 STRN3Q13033 797 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 HNRNPDQ14103 355 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ENOX2Q16206 610 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 EMC10Q5UCC4 262 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 JADE1Q6IE81 842 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ZPBP2Q6X784 338 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 MINDY1Q8N5J2 469 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 DEFB119Q8N690 84 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ALLCQ8N6M5 410 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 C4orf32Q8N8J7 132 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 NECAB1Q8N987 351 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 IL17RCQ8NAC3 791 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 TXNDC5Q8NBS9 432 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 CEP76Q8TAP6 659 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms