RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MTF1Q14872 753 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 PDGFRLQ15198 375 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SV2CQ496J9 727 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 FBXO43Q4G163 708 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 SDHAF4Q5VUM1 108 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CYP2U1Q7Z449 544 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 TSTD1Q8NFU3 115 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 NOC3LQ8WTT2 800 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CD101Q93033 1021 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CALML4Q96GE6 196 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZNF560Q96MR9 790 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 PNMA5Q96PV4 448 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 FAM83CQ9BQN1 747 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 UXTQ9UBK9 157 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ODF2LQ9ULJ1 636 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZMIZ1Q9ULJ6 1067 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 WNT6Q9Y6F9 365 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
CDC42BPB-207ENST00000560492 CHD6Q8TD26 2715 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ABCA7Q8IZY2 2146 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZFHX4Q86UP3 3567 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 PIRO00625 290 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 KHNYNO15037 678 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 GJA4P35212 333 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 DHPSP49366 369 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 SMARCB1Q12824 385 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ANO7Q6IWH7 933 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ATP2A3Q93084 1043 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 PARVGQ9HBI0 331 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 FBRSL1Q9HCM7 1045 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 TMEM9BQ9NQ34 198 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 DERAQ9Y315 318 aa11.3□□□□□ -0.6
CDC42BPB-207ENST00000560492 A0A0B4J269 797 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 LNP1A1A4G5 178 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 TRAK2O60296 914 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 F11P03951 625 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 USP17L7P0C7H9 530 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 UBA7P41226 1012 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 RPL10AP62906 217 aaKnown RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 COL9A2Q14055 689 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 KCNB1Q14721 858 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 NFE2Q16621 373 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 DDR2Q16832 855 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 C2orf27AQ580R0 203 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 HYIQ5T013 277 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 KIAA1211LQ6NV74 962 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 SYT13Q7L8C5 426 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 MON1AQ86VX9 555 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 POMGNT1Q8WZA1 660 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 PIGKQ92643 395 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 ASB7Q9H672 318 aa11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
CDC42BPB-207ENST00000560492 PATE3B3GLJ2 98 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 TISP43B9A030 160 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 H3BQV1 296 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 FAM189A1O60320 539 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 HUS1O60921 280 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 PIGRP01833 764 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 HMGA1P17096 107 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 SCP2P22307 547 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ACAT1P24752 427 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ABCD1P33897 745 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 MAPK8P45983 427 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ATP2C1P98194 919 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 TFAMQ00059 246 aaKnown RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 MYL7Q01449 175 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 TMEM119Q4V9L6 283 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 C11orf74Q86VG3 221 aa11.28□□□□□ -0.6
CDC42BPB-207ENST00000560492 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms