RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 SPTLC1O15269 473 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 OPA1O60313 960 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 ECEL1O95672 775 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 IL1R2P27930 398 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 FLT3LGP49771 235 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 NFX1Q12986 1120 aaKnown RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 CDO1Q16878 200 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 PLVAPQ9BX97 442 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 RASAL2Q9UJF2 1139 aa14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 BARX2Q9UMQ3 279 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-203ENST00000560349 TRPM7Q96QT4 1865 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 E5RJQ4 531 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 MED7O43513 233 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 PSTPIP1O43586 416 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 P4HA1P13674 534 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 HSPA6P17066 643 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 CDH5P33151 784 aaPredicted RBP14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 GPD2P43304 727 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 GOLGA7BQ2TAP0 167 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 OR6B3Q8NGW1 331 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 DCLK3Q9C098 648 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM187AA6NFU0 413 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 CD48P09326 243 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 PAEPP09466 180 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 AKR1A1P14550 325 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 ELNP15502 786 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 ATICP31939 592 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 CCT5P48643 541 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 GNGT1P63211 74 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 PRKCZQ05513 592 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 MYO1EQ12965 1108 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 KLF1Q13351 362 aaPredicted RBP14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 CYP1B1Q16678 543 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 B4GALNT4Q76KP1 1039 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 MREGQ8N565 214 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 GLIS1Q8NBF1 620 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 NT5C1AQ9BXI3 368 aa14.86□□□□□ -0.03
CARMIL3-203ENST00000560349 SMIM28A0A1B0GU29 152 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 LRCH4O75427 683 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 SHBGP04278 402 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 LMO2P25791 158 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 NBPF20Q3BBV1 942 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 UBXN11Q5T124 520 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 PACS2Q86VP3 889 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 TAB3Q8N5C8 712 aaPredicted RBP14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 SOCS4Q8WXH5 440 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 B3GNT5Q9BYG0 378 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 IPPQ9Y573 584 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 ZNF236Q9UL36 1845 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 CCDC130P13994 396 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 HPDP32754 393 aaPredicted RBP14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 GDF6Q6KF10 455 aaPredicted RBP14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 TRNP1Q6NT89 227 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM228AQ86W67 206 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 TTC30AQ86WT1 665 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 LPPQ93052 612 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 SLITRK1Q96PX8 696 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 ZNF518BQ9C0D4 1074 aa14.85□□□□□ -0.03
CARMIL3-203ENST00000560349 DCDC2CA8MYV0 355 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 AOC2O75106 756 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 PFKMP08237 780 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 ZSCAN5DPP0CG00 497 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 FGFR1P11362 822 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 ETS1P14921 441 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 ADORA2BP29275 332 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 SOWAHAQ2M3V2 549 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 C9orf57Q5W0N0 161 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 OR6B2Q6IFH4 312 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 PMF1Q6P1K2 205 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 LRRC45Q96CN5 670 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 MIS12Q9H081 205 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 SEMA4AQ9H3S1 761 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 VRTNQ9H8Y1 702 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 DNPEPQ9ULA0 475 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 H0YGN5 161 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 FNTAP49354 379 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 SKOR1P84550 965 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 ATP11AP98196 1134 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 INCA1Q0VD86 236 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 CLUL1Q15846 466 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 PPP2R5EQ16537 467 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 FAM183BPQ6ZVS7 135 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 SMG8Q8ND04 991 aaKnown RBP14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 BEST2Q8NFU1 509 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 HSPH1Q92598 858 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 LHX5Q9H2C1 402 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 NFS1Q9Y697 457 aa14.84□□□□□ -0.03
CARMIL3-203ENST00000560349 A8MXQ7 604 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms