RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TRIM68Q6AZZ1 485 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CGB2Q6NT52 195 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 C8orf86Q6ZUL3 223 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF365Q70YC5 407 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ARHGAP24Q8N264 748 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ANKRD35Q8N283 1001 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NME8Q8N427 588 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 KIF2BQ8N4N8 673 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 UBL4BQ8N7F7 174 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 BBOF1Q8ND07 529 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC30A5Q8TAD4 765 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SLC7A6OSQ96CW6 309 aaPredicted RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 RMDN2Q96LZ7 410 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 MTMR9Q96QG7 549 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC77Q9BR77 488 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 CELF4Q9BZC1 486 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NT5C3AQ9H0P0 336 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 MYLK2Q9H1R3 596 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 GREM2Q9H772 168 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 C6orf50Q9HD87 102 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SSU72Q9NP77 194 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NMRK1Q9NWW6 199 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 STX18Q9P2W9 335 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 NKX1-2Q9UD57 310 aaPredicted RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ARMCX3Q9UH62 379 aaPredicted RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 ANGPTL2Q9UKU9 493 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 HDAC9Q9UKV0 1011 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 MTUS1Q9ULD2 1270 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 SMG5Q9UPR3 1016 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 TRAF3IP3Q9Y228 551 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 PTCH2Q9Y6C5 1203 aa6.31□□□□□ -1.4
SNRPA1-209ENST00000560307 COL24A1Q17RW2 1714 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 UMODL1Q5DID0 1318 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 SLX4Q8IY92 1834 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 SMIM31A0A1B0GVY4 71 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 hCG_1642624A0A1W2PR95 340 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 F8W8V4 182 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 DDX3XO00571 662 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 NKRFO15226 690 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 STRNO43815 780 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ATP9AO75110 1047 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 GAS8O95995 478 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ATP5BP06576 529 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 PYGLP06737 847 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 BRAFP15056 766 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 DESP17661 470 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ITIH2P19823 946 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TAC1P20366 129 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 YY1P25490 414 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RANBP1P43487 201 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RPL21P46778 160 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TUBP50607 506 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RNASE9P60153 205 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 XIAPP98170 497 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 MGAT5Q09328 741 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 CALCOCO2Q13137 446 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TMED1Q13445 227 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 GIT2Q14161 759 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RCN2Q14257 317 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC6Q16204 474 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 EXOC3L4Q17RC7 722 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 INF2Q27J81 1249 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ACBD5Q5T8D3 534 aaPredicted RBP6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 DCAF12L1Q5VU92 463 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM117BQ6P1L5 589 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC174Q6PII3 467 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 RHBDF2Q6PJF5 856 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC74BQ6ZQY2 392 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 C4orf50Q6ZRC1 276 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ANKRD23Q86SG2 305 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ADGRG6Q86SQ4 1221 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 NLRP10Q86W26 655 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LONP2Q86WA8 852 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC43Q8N309 656 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 IL22RA1Q8N6P7 574 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 GRK7Q8WTQ7 553 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 C10orf82Q8WW14 230 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 DNAJC19Q96DA6 116 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 PLPPR2Q96GM1 343 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC37BQ96QE4 947 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 NDNQ99608 321 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 SYT11Q9BT88 431 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 TBC1D10AQ9BXI6 508 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 PITPNM3Q9BZ71 974 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 MTFR1LQ9H019 292 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms