RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 KRIT1O00522 736 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 AARSP49588 968 aaKnown RBP eCLIP24.82■■□□□ 1.56
TM2D3-209ENST00000560013 GPNMBQ14956 572 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 LONRF2Q1L5Z9 754 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 GLE1Q53GS7 698 aaKnown RBP24.82■■□□□ 1.56
TM2D3-209ENST00000560013 SEL1L2Q5TEA6 688 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 GLB1LQ6UWU2 654 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 B3GALNT2Q8NCR0 500 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 SLC35F5Q8WV83 523 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 MCRS1Q96EZ8 462 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 UROC1Q96N76 676 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 AP1M1Q9BXS5 423 aa24.82■■□□□ 1.56
TM2D3-209ENST00000560013 CCDC188H7C350 402 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 PYGMP11217 842 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 CLCN6P51797 869 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 ZNF252P-AS1Q0IIN9 211 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 PIGHQ14442 188 aaPredicted RBP24.81■■□□□ 1.56
TM2D3-209ENST00000560013 PLEKHG4Q58EX7 1191 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 WDR93Q6P2C0 686 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 SLC39A5Q6ZMH5 540 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 ANKRD52Q8NB46 1076 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 PLVAPQ9BX97 442 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 CRISPLD2Q9H0B8 497 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 B3GAT3O94766 335 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 CCDC130P13994 396 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 RFC1P35251 1148 aaPredicted RBP24.81■■□□□ 1.56
TM2D3-209ENST00000560013 LHX1P48742 406 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 ATN1P54259 1190 aaPredicted RBP24.81■■□□□ 1.56
TM2D3-209ENST00000560013 OGDHQ02218 1023 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 C8orf74Q6P047 294 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 PMF1Q6P1K2 205 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 ANKRD33Q7Z3H0 272 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 RHOT1Q8IXI2 618 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 DBF4BQ8NFT6 615 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 STK32AQ8WU08 396 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 SLC4A5Q9BY07 1137 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 USTQ9Y2C2 406 aa24.81■■□□□ 1.56
TM2D3-209ENST00000560013 CCDC151A5D8V7 595 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 E5RJQ4 531 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 PSTPIP1O43586 416 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 PAX3P23760 479 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 BCAT1P54687 386 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 PDE4CQ08493 712 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 BRD3Q15059 726 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 TIGD5Q53EQ6 642 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 DAB2IPQ5VWQ8 1189 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 AADACL2Q6P093 401 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 FAM43BQ6ZT52 329 aaPredicted RBP24.8■■□□□ 1.56
TM2D3-209ENST00000560013 NIPA2Q8N8Q9 360 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 KRT12Q99456 494 aa24.8■■□□□ 1.56
TM2D3-209ENST00000560013 METTL5Q9NRN9 209 aaKnown RBP24.8■■□□□ 1.56
TM2D3-209ENST00000560013 DDX43Q9NXZ2 648 aaKnown RBP24.8■■□□□ 1.56
TM2D3-209ENST00000560013 TULP2O00295 520 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 PTPN1P18031 435 aaKnown RBP24.79■■□□□ 1.56
TM2D3-209ENST00000560013 MCM3P25205 808 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 ADORA2BP29275 332 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 MNX1P50219 401 aaPredicted RBP24.79■■□□□ 1.56
TM2D3-209ENST00000560013 SNX16P57768 344 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 VSNL1P62760 191 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 BST2Q10589 180 aaKnown RBP24.79■■□□□ 1.56
TM2D3-209ENST00000560013 JOSD2Q8TAC2 188 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 SLC2A14Q8TDB8 520 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 FNIP1Q8TF40 1166 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 COL6A1P12109 1028 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 ACAT1P24752 427 aaKnown RBP24.79■■□□□ 1.56
TM2D3-209ENST00000560013 RGS7P49802 495 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 TAS2R40P59535 323 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 CLLU1OSQ5K130 101 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 TMEM110Q86TL2 294 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 SEPT8Q92599 483 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 TMEM161AQ9NX61 479 aa24.79■■□□□ 1.56
TM2D3-209ENST00000560013 F8VP50 259 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 ENPP3O14638 875 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 ATP2C2O75185 946 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 SSR1P43307 286 aaKnown RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 NOMO2Q5JPE7 1267 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 FAM102AQ5T9C2 384 aaPredicted RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 OR6B2Q6IFH4 312 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 CC2D1AQ6P1N0 951 aaPredicted RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 KLHL7Q8IXQ5 586 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 URGCPQ8TCY9 931 aa24.78■■□□□ 1.56
TM2D3-209ENST00000560013 HNRNPABQ99729 332 aaKnown RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 ELAC1Q9H777 363 aaKnown RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 TIMM13Q9Y5L4 95 aaPredicted RBP24.78■■□□□ 1.56
TM2D3-209ENST00000560013 DCDC2CA8MYV0 355 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 PIK3R2O00459 728 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 ODC1P11926 461 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 DCLRE1AQ6PJP8 1040 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 CD300LGQ6UXG3 332 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 FAM183BPQ6ZVS7 135 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 HDAC7Q8WUI4 952 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 APBB2Q92870 758 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 ZNF333Q96JL9 665 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 KANSL3Q9P2N6 904 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 TANC1Q9C0D5 1861 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 SCN5AQ14524 2016 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 CAPN15O75808 1086 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 PSMA2P25787 234 aa24.77■■□□□ 1.56
TM2D3-209ENST00000560013 PAN2Q504Q3 1202 aaKnown RBP24.77■■□□□ 1.56
TM2D3-209ENST00000560013 TMCO3Q6UWJ1 677 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms