RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 MYBPHLA2RUH7 354 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 KIF5CO60282 957 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 MYBL1P10243 752 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
HERC1-205ENST00000559886 MDH1BQ5I0G3 518 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 PAQR9Q6ZVX9 377 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
HERC1-205ENST00000559886 SLC39A11Q8N1S5 342 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 COLGALT1Q8NBJ5 622 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 RAD9AQ99638 391 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 ADAM22Q9P0K1 906 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 MYO1AQ9UBC5 1043 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 CYP1A2P05177 515 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
HERC1-205ENST00000559886 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 TCEAL1Q15170 157 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 MMS22LQ6ZRQ5 1243 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 ERICH1Q86X53 443 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 SLC35F5Q8WV83 523 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
HERC1-205ENST00000559886 ZNF653Q96CK0 615 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 C11orf70Q9BRQ4 267 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 B3GNT5Q9BYG0 378 aa12.9□□□□□ -0.34
HERC1-205ENST00000559886 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
HERC1-205ENST00000559886 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 CAPN15O75808 1086 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 TUBB4AP04350 444 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 ADORA2BP29275 332 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 BCAT1P54687 386 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 TSPY1Q01534 308 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 PTPN20Q4JDL3 420 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 TAS1R1Q7RTX1 841 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 B3GALT6Q96L58 329 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 NOX5Q96PH1 765 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 TTPALQ9BTX7 342 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 VN1R3Q9BXE9 311 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 CALB1P05937 261 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 MAGEA10P43363 369 aaPredicted RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 PDE4CQ08493 712 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 PDCLQ13371 301 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 RTP2Q5QGT7 225 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 LRRTM3Q86VH5 581 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 TMEM169Q96HH4 297 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 TMEM209Q96SK2 561 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 DUSP16Q9BY84 665 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 AAASQ9NRG9 546 aa12.89□□□□□ -0.35
HERC1-205ENST00000559886 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
HERC1-205ENST00000559886 GBF1Q92538 1859 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 CLDN5O00501 218 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
HERC1-205ENST00000559886 BUB1O43683 1085 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 TLL1O43897 1013 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 MOCS3O95396 460 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 TNNT1P13805 278 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 RRM1P23921 792 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 GABRB2P47870 512 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
HERC1-205ENST00000559886 GNG11P61952 73 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 LIN9Q5TKA1 542 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 ZNF280DQ6N043 979 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 ZCWPW1Q9H0M4 648 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 TMLHEQ9NVH6 421 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 TULP2O00295 520 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 MTA2O94776 668 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 PPM1AP35813 382 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 MYLPFQ96A32 169 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 MED10Q9BTT4 135 aa12.88□□□□□ -0.35
HERC1-205ENST00000559886 SLC4A5Q9BY07 1137 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms