RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 GDE1Q9NZC3 331 aa15.85■□□□□ 0.13
RABGGTA-211ENST00000559850 MAGEC2Q9UBF1 373 aaPredicted RBP15.85■□□□□ 0.13
RABGGTA-211ENST00000559850 HMGXB4Q9UGU5 601 aa15.85■□□□□ 0.13
RABGGTA-211ENST00000559850 ASB3Q9Y575 518 aa15.85■□□□□ 0.13
RABGGTA-211ENST00000559850 MYH10P35580 1976 aa15.85■□□□□ 0.13
RABGGTA-211ENST00000559850 ANAPC1Q9H1A4 1944 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 KRBA1A5PL33 1030 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 SLC38A8A6NNN8 435 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 CLDN5O00501 218 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 PSMA7O14818 248 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 PTPN1P18031 435 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 ASPAP45381 313 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 CACNA2D1P54289 1103 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 STIM1Q13586 685 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 SGSM1Q2NKQ1 1148 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 GPR158Q5T848 1215 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 TCERG1LQ5VWI1 586 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 BMP8AQ7Z5Y6 402 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 ZC3H3Q8IXZ2 948 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 FBXL6Q8N531 539 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 LEMD2Q8NC56 503 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 FLCNQ8NFG4 579 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 MYCBPAPQ8TBZ2 947 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 SEMA4DQ92854 862 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 RSPRY1Q96DX4 576 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 DHTKD1Q96HY7 919 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 ASB16Q96NS5 453 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 DUSP9Q99956 384 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 MKNK1Q9BUB5 465 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 SMG9Q9H0W8 520 aaKnown RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 TMEM8AQ9HCN3 771 aa15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 KIF26AQ9ULI4 1882 aaPredicted RBP15.84■□□□□ 0.13
RABGGTA-211ENST00000559850 COL4A2P08572 1712 aa15.83■□□□□ 0.13
RABGGTA-211ENST00000559850 MICAL2O94851 1124 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 RPL10AP62906 217 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 TTI2Q6NXR4 508 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 C4orf50Q6ZRC1 276 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 TMEM150AQ86TG1 271 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 ACOT1Q86TX2 421 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 SUGP1Q8IWZ8 645 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 B3GALNT2Q8NCR0 500 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 ZNF518BQ9C0D4 1074 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 MFSD1Q9H3U5 465 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 ABCB6Q9NP58 842 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
RABGGTA-211ENST00000559850 SLC16A3O15427 465 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 ECI2O75521 394 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 NPR3P17342 541 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 GRIK1P39086 918 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 MXI1P50539 228 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 NOP14P78316 857 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 CFAP221Q4G0U5 840 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 CBWD6Q4V339 395 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 CBWD3Q5JTY5 395 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 CBWD5Q5RIA9 395 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 KRT39Q6A163 491 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 VITQ6UXI7 678 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 SMARCD2Q92925 531 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 ELSPBP1Q96BH3 223 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 TWNKQ96RR1 684 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 ZFP14Q9HCL3 533 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 KIAA1468Q9P260 1216 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 ZNF318Q5VUA4 2279 aa15.82■□□□□ 0.12
RABGGTA-211ENST00000559850 TADA3O75528 432 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 NOL4O94818 638 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 F11P03951 625 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 P4HA1P13674 534 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 CD58P19256 250 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 MAGEA11P43364 429 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 NDST1P52848 882 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 NLRP12P59046 1061 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 TMEM105Q8N8V8 129 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 TAF4BQ92750 862 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 FUBP3Q96I24 572 aaKnown RBP eCLIP15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 IPO9Q96P70 1041 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 GCNAQ96QF7 691 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 MED10Q9BTT4 135 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 CLSTN2Q9H4D0 955 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 SLC2A4RGQ9NR83 387 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 LMBRD1Q9NUN5 540 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 ARMCX3Q9UH62 379 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 HCN4Q9Y3Q4 1203 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 MYO16Q9Y6X6 1858 aa15.81■□□□□ 0.12
RABGGTA-211ENST00000559850 HELZP42694 1942 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 MIA3Q5JRA6 1907 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 PATJQ8NI35 1801 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 HEPACAM2A8MVW5 462 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 F8VP50 259 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 STK25O00506 426 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 PI15O43692 258 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 PRAMEF12O95522 483 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 FAM163BP0C2L3 166 aa15.8■□□□□ 0.12
RABGGTA-211ENST00000559850 CSH1P0DML2 217 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms