RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PHLDB3Q6NSJ2 640 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 STKLD1Q8NE28 680 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 PDCD6IPQ8WUM4 868 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 SYT15Q9BQS2 421 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 FTHL17Q9BXU8 183 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 CYP4F11Q9HBI6 524 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 LSM7Q9UK45 103 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 I3L4J1 428 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 TROVE2P10155 538 aaKnown RBP eCLIP11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 SAT1P21673 171 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 NNMTP40261 264 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 CBWD6Q4V339 395 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 CBWD3Q5JTY5 395 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 CBWD5Q5RIA9 395 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 ZNF677Q86XU0 584 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 MIB1Q86YT6 1006 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 MIPOL1Q8TD10 442 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 FAM84AQ96KN4 292 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 NXF3Q9H4D5 531 aaKnown RBP11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 PCDHA2Q9Y5H9 948 aa11.18□□□□□ -0.62
CARMIL3-202ENST00000559694 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 SNAI1O95863 264 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 NFICP08651 508 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 IRF1P10914 325 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 CCND3P30281 292 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 CDR2Q01850 454 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 EFHC1Q5JVL4 640 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TTC30AQ86WT1 665 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 SENP8Q96LD8 212 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 ZIM3Q96PE6 472 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TSC22D3Q99576 134 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 LRP5O75197 1615 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 PODXLO00592 558 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 OPLAHO14841 1288 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 ADRB2P07550 413 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 SELPP16109 830 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 SLC47A2Q86VL8 602 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 ANAPC5Q9UJX4 755 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 RAB21Q9UL25 225 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TULP2O00295 520 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TGFB1I1O43294 461 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 TLE2Q04725 743 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 NOMO2Q5JPE7 1267 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 BHMTQ93088 406 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 EPAS1Q99814 870 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 FGFBP2Q9BYJ0 223 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 CCDC68Q9H2F9 335 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 COL1A2P08123 1366 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 ASTN1O14525 1302 aa11.17□□□□□ -0.62
CARMIL3-202ENST00000559694 H3BRJ5 948 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CCDC188H7C350 402 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 BAG2O95816 211 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 GEN1Q17RS7 908 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 ZC3H18Q86VM9 953 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 FBXO32Q969P5 355 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CHMP6Q96FZ7 201 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 MS4A14Q96JA4 679 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 MBOAT7Q96N66 472 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 VCX3BQ9H321 246 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 TAF1P21675 1872 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 F8VZ95 297 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 M0R2N6 131 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 MAP2K7O14733 419 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CKMP06732 381 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 KLRC2P26717 231 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 NCKAP1LP55160 1127 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 RPL10AP62906 217 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 PCBP1Q15365 356 aaKnown RBP eCLIP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 NT5DC4Q86YG4 428 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 RNPC3Q96LT9 517 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 WNT8AQ9H1J5 351 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 XPNPEP1Q9NQW7 623 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 DHX15O43143 795 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CYBBP04839 570 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CCL5P13501 91 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 TPI1P60174 286 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 IL9RQ01113 521 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms