RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CYP26A1O43174 497 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 TGM5O43548 720 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 MFAP3LO75121 409 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 ADH1AP07327 375 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 MAGEA11P43364 429 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 PLCB2Q00722 1185 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 ORC1Q13415 861 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 RAPGEF1Q13905 1077 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 BMS1Q14692 1282 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 CNGA2Q16280 664 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 CTC1Q2NKJ3 1217 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 LCLAT1Q6UWP7 414 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 RNF19BQ6ZMZ0 732 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 SLC47A2Q86VL8 602 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 DRC7Q8IY82 874 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 TC2NQ8N9U0 490 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 VN1R2Q8NFZ6 395 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 SPPL2BQ8TCT7 592 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 ZNF606Q8WXB4 792 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 PCMTD1Q96MG8 357 aaPredicted RBP15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 NSUN3Q9H649 340 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 LUC7L2Q9Y383 392 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 MYO9BQ13459 2157 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 GREB1Q4ZG55 1949 aa15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 PRRC2BQ5JSZ5 2229 aaKnown RBP15.74■□□□□ 0.11
SNRPA1-207ENST00000559309 NCOR1O75376 2440 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 SEC24AO95486 1093 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 POU2F2P09086 479 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 CYP11B1P15538 503 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 CHRNB2P17787 502 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 RPL34P49207 117 aaKnown RBP15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 BPIFB4P59827 614 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 HYAL1Q12794 435 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 STILQ15468 1287 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 SLC39A12Q504Y0 691 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 ZNF394Q53GI3 561 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 MDH1BQ5I0G3 518 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 PPP1R26Q5T8A7 1209 aaPredicted RBP15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 CACNA2D4Q7Z3S7 1137 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 PPFIBP1Q86W92 1011 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 ZNF677Q86XU0 584 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 FMNL3Q8IVF7 1028 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 MYLPFQ96A32 169 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 CYFIP2Q96F07 1278 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 PRDM6Q9NQX0 595 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 IMPACTQ9P2X3 320 aa15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.73■□□□□ 0.11
SNRPA1-207ENST00000559309 GLP2RO95838 553 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 FERP16591 822 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 CDH5P33151 784 aaPredicted RBP15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 KRT9P35527 623 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 CACNA2D1P54289 1103 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 CDK17Q00537 523 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 SGO2Q562F6 1265 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 VSTM1Q6UX27 236 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 NOP9Q86U38 636 aaKnown RBP15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 FAM35AQ86V20 835 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 TTC30AQ86WT1 665 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 EFHBQ8N7U6 833 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 ZMIZ2Q8NF64 920 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 SLC2A14Q8TDB8 520 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 CEP295NLQ96MC4 621 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 RHOBTB2Q9BYZ6 727 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 UBXN6Q9BZV1 441 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 PLEKHA4Q9H4M7 779 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 ABHD10Q9NUJ1 306 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 PCDHB5Q9Y5E4 795 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 HCFC2Q9Y5Z7 792 aa15.72■□□□□ 0.11
SNRPA1-207ENST00000559309 HHLA1C9JL84 531 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 GFPT2O94808 682 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CALCAP01258 141 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CFHP08603 1231 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 HAPLN1P10915 354 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 KRT5P13647 590 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CCDC130P13994 396 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CPB1P15086 417 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 KLRC2P26717 231 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 GNA15P30679 374 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 HOXA9P31269 272 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 PTK2Q05397 1052 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 ADAM15Q13444 863 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 TCEAL5Q5H9L2 206 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CLEC20AQ6ZU45 233 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 ANKRD52Q8NB46 1076 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 ATAD1Q8NBU5 361 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 OR8K1Q8NGG5 319 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 MICAL1Q8TDZ2 1067 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 HEXIM2Q96MH2 286 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 SMOQ99835 787 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 ZNF518BQ9C0D4 1074 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 LHX5Q9H2C1 402 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 PNPLA8Q9NP80 782 aa15.71■□□□□ 0.11
SNRPA1-207ENST00000559309 IL37Q9NZH6 218 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms