RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 EML5Q05BV3 1969 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 MYBPHLA2RUH7 354 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 ZNF263O14978 683 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 CYP2F1P24903 491 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 MLLT6P55198 1093 aaPredicted RBP18.22■□□□□ 0.51
LRRC28-210ENST00000558879 RPL10AP62906 217 aaKnown RBP18.22■□□□□ 0.51
LRRC28-210ENST00000558879 CLDN10P78369 228 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 CCDC127Q96BQ5 260 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 MYRFLQ96LU7 910 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 LRRC3BQ96PB8 259 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 XYLT2Q9H1B5 865 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 VRTNQ9H8Y1 702 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 CRTAC1Q9NQ79 661 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 R3HCC1Q9Y3T6 440 aaKnown RBP18.22■□□□□ 0.51
LRRC28-210ENST00000558879 PIAS3Q9Y6X2 628 aa18.22■□□□□ 0.51
LRRC28-210ENST00000558879 ATG2BQ96BY7 2078 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
LRRC28-210ENST00000558879 MAN2B1O00754 1011 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 PDXKO00764 312 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 EXOC3O60645 756 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 ATP2C2O75185 946 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 TACC1O75410 805 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 RHOBTB3O94955 611 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 LMO2P25791 158 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 DDX6P26196 483 aaKnown RBP eCLIP18.21■□□□□ 0.51
LRRC28-210ENST00000558879 MAGEA11P43364 429 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 PSMC1P62191 440 aaKnown RBP18.21■□□□□ 0.51
LRRC28-210ENST00000558879 DPYDQ12882 1025 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 DDR2Q16832 855 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 SDHAF4Q5VUM1 108 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 PARD3BQ8TEW8 1205 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 MYLPFQ96A32 169 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 MSANTD3Q96H12 275 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 SLC46A2Q9BY10 475 aa18.21■□□□□ 0.51
LRRC28-210ENST00000558879 MRPS17Q9Y2R5 130 aaKnown RBP18.21■□□□□ 0.51
LRRC28-210ENST00000558879 CFAP54Q96N23 3096 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 OTOGLQ3ZCN5 2332 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 SOBPA7XYQ1 873 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 RPN1P04843 607 aaKnown RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 FAM163BP0C2L3 166 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 SP9P0CG40 484 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 CASP4P49662 377 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 TAF12Q16514 161 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 TDRD10Q5VZ19 366 aaKnown RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 CMTM8Q8IZV2 173 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 BPIFB1Q8TDL5 484 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 NKD2Q969F2 451 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 MRPL45Q9BRJ2 306 aaKnown RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 UXTQ9UBK9 157 aaPredicted RBP18.2■□□□□ 0.5
LRRC28-210ENST00000558879 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
LRRC28-210ENST00000558879 GVINP1Q7Z2Y8 2422 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 SLC38A8A6NNN8 435 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 NCAM2O15394 837 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 NR3C1P04150 777 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 ATICP31939 592 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 MYL6P60660 151 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
LRRC28-210ENST00000558879 WDR72Q3MJ13 1102 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 C1orf228Q6PIY5 440 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 VSTM1Q6UX27 236 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 YAF2Q8IY57 180 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 FAM3CQ92520 227 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 PCED1BQ96HM7 432 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 CEP295NLQ96MC4 621 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 MMS19Q96T76 1030 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 IER2Q9BTL4 223 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 CHRDQ9H2X0 955 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 KIF9Q9HAQ2 790 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 PRMT8Q9NR22 394 aaPredicted RBP18.19■□□□□ 0.5
LRRC28-210ENST00000558879 FBXO4Q9UKT5 387 aa18.19■□□□□ 0.5
LRRC28-210ENST00000558879 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 DPYSL4O14531 572 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 C4BPAP04003 597 aaKnown RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 AP3M2P53677 418 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 TNNC1P63316 161 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 KCNB1Q14721 858 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 NFIL3Q16649 462 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 ZNF528Q3MIS6 628 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 GPIHBP1Q8IV16 184 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 CELF5Q8N6W0 485 aaKnown RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 RIN3Q8TB24 985 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 USP13Q92995 863 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 ZFYVE19Q96K21 471 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 SPATA17Q96L03 361 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 SMG9Q9H0W8 520 aaKnown RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 SEMA4AQ9H3S1 761 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 GDPD2Q9HCC8 539 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 SPATA6Q9NWH7 488 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 MAGEC2Q9UBF1 373 aaPredicted RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 NDRG2Q9UN36 371 aaKnown RBP18.18■□□□□ 0.5
LRRC28-210ENST00000558879 MAGED2Q9UNF1 606 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms