RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SDHBP21912 280 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 FCARP24071 287 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 NAMPTP43490 491 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
SPG11-212ENST00000558790 CLCNKBP51801 687 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 PCSK7Q16549 785 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 UPP1Q16831 310 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 UVSSAQ2YD98 709 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 DCAF4L1Q3SXM0 396 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 ZBTB41Q5SVQ8 909 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 CD300LGQ6UXG3 332 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 CHSY3Q70JA7 882 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 GALNT12Q8IXK2 581 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 DIS3L2Q8IYB7 885 aaKnown RBP10.6□□□□□ -0.71
SPG11-212ENST00000558790 CEP120Q8N960 986 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 ZBTB44Q8NCP5 570 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 GIPC2Q8TF65 315 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 NELL1Q92832 810 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 CLDN23Q96B33 292 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 BTBD6Q96KE9 485 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 SPACA7Q96KW9 195 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 HHIPQ96QV1 700 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 ZSCAN32Q9NX65 697 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 ANGPTL2Q9UKU9 493 aa10.6□□□□□ -0.71
SPG11-212ENST00000558790 MRPS23Q9Y3D9 190 aaKnown RBP10.6□□□□□ -0.71
SPG11-212ENST00000558790 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.6□□□□□ -0.71
SPG11-212ENST00000558790 KIAA1549LQ6ZVL6 1849 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 PRR5-ARHGAP8B1AHC4 643 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 XRCC6P12956 609 aaKnown RBP eCLIP10.59□□□□□ -0.71
SPG11-212ENST00000558790 PMLP29590 882 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 BRCC3P46736 316 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 RPS9P46781 194 aaKnown RBP10.59□□□□□ -0.71
SPG11-212ENST00000558790 ARHGAP8P85298 464 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 ROR1Q01973 937 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 LMNB2Q03252 620 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
SPG11-212ENST00000558790 MTAPQ13126 283 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 FZD5Q13467 585 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 GRM2Q14416 872 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 PEAR1Q5VY43 1037 aaPredicted RBP10.59□□□□□ -0.71
SPG11-212ENST00000558790 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 ATRIPQ8WXE1 791 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 GTF3C6Q969F1 213 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 MCRS1Q96EZ8 462 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 SMG9Q9H0W8 520 aaKnown RBP10.59□□□□□ -0.71
SPG11-212ENST00000558790 RASSF4Q9H2L5 321 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 GDE1Q9NZC3 331 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 BACE2Q9Y5Z0 518 aa10.59□□□□□ -0.71
SPG11-212ENST00000558790 SCN1AP35498 2009 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ARHGEF37A1IGU5 675 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 WDR27A2RRH5 827 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ARHGEF35A5YM69 484 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 JAK2O60674 1132 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 PROS1P07225 676 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 TDGF1P13385 188 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 EDN3P14138 238 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 CYP11B2P19099 503 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 MCM7P33993 719 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ME3Q16798 604 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 N4BP2L1Q5TBK1 243 aaPredicted RBP10.58□□□□□ -0.72
SPG11-212ENST00000558790 NT5DC1Q5TFE4 455 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ATF7IP2Q5U623 682 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 TANGO2Q6ICL3 276 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ZNF852Q6ZMS4 543 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 RTL10Q7L3V2 364 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 NSUN7Q8NE18 718 aaKnown RBP10.58□□□□□ -0.72
SPG11-212ENST00000558790 DNASE1L2Q92874 299 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 ELSPBP1Q96BH3 223 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 PLD4Q96BZ4 506 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 UROC1Q96N76 676 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 POLR3CQ9BUI4 534 aaPredicted RBP10.58□□□□□ -0.72
SPG11-212ENST00000558790 POLD4Q9HCU8 107 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
SPG11-212ENST00000558790 NCANO14594 1321 aa10.58□□□□□ -0.72
SPG11-212ENST00000558790 KALRNO60229 2985 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 PRRG1O14668 218 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 SLC30A4O14863 429 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 LRG1P02750 347 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 CCR2P41597 374 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPG11-212ENST00000558790 FAM78AQ5JUQ0 283 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 SLC8B1Q6J4K2 584 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 SECISBP2LQ93073 1101 aaKnown RBP10.57□□□□□ -0.72
SPG11-212ENST00000558790 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 NACC1Q96RE7 527 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 CORO1BQ9BR76 489 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 MRPS17Q9Y2R5 130 aaKnown RBP10.57□□□□□ -0.72
SPG11-212ENST00000558790 INSL5Q9Y5Q6 135 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms